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SCNpilot_cont_300_bf_scaffold_1295_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1295_curated_1
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..104)
DNA (102bp) protein (34aa)
Transposase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X2L3_9BRAD
Transposase {ECO:0000313|EMBL:EAQ33524.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_300_bf_scaffold_1295_curated_2
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180..1040)
DNA (861bp) protein (287aa)
Type I secretion membrane fusion protein, HlyD family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ICU7_METNO
HlyD family type I secretion membrane fusion protein; K02022 HlyD family secretion protein
Type I secretion membrane fusion protein, HlyD family {ECO:0000313|EMBL:ACL57508.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_300_bf_scaffold_1295_curated_3
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1037..1828)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EEF0A2
Type I secretion system ATPase {ECO:0000313|EMBL:EHH13877.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
type I secretion system ATPase
SCNpilot_cont_300_bf_scaffold_1295_curated_4
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2062..2949)
DNA (888bp) protein (296aa)
Soluble epoxide hydrolase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NSD7_GRAMM
Contig85, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75744.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
soluble epoxide hydrolase
SCNpilot_cont_300_bf_scaffold_1295_curated_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2927..3679)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0KBY8_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJC75049.1}; Flags: Precursor;; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_300_bf_scaffold_1295_curated_6
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

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4336..4653
DNA (318bp) protein (106aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
Probable high-affinity branched-chain amino acid ABC transporter, permease protein id=2272648 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RBG_13_Chloroflexi_54_9_curated
SCNpilot_cont_300_bf_scaffold_1295_curated_7
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4643..6502
DNA (1860bp) protein (620aa)
Branched-chain amino acid transport system permease protein LivM/branched-chain amino acid transport ATP-binding protein livG n=1 Tax=Thermus scotoductus (strain ATCC 700910 / SA-01) RepID=E8PPT5_THESS
Uncharacterized protein {ECO:0000313|EMBL:AIY03101.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
branched-chain amino acid transport system permease LivM/branched-chain amino acid transport ATP-binding protein livG; K01995 branched-chain amino acid transport system ATP-binding protein; K01998 branched-chain amino acid transport system permease protein
SCNpilot_cont_300_bf_scaffold_1295_curated_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6499..7209
DNA (711bp) protein (237aa)
Branched-chain amino acid ABC transporter, ATP-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XMF5_VARPD
branched-chain amino acid ABC transporter, ATP-binding protein
Branched-chain amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGU53783.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_1295_curated_9
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7308..8441
DNA (1134bp) protein (378aa)
Extracellular ligand-binding receptor n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SIA4_THEM7
Uncharacterized protein {ECO:0000313|EMBL:AIY03103.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_1295_curated_10
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9338..10507)
DNA (1170bp) protein (390aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMD0_PUSST
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AEC19035.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
SCNpilot_cont_300_bf_scaffold_1295_curated_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10851..11600)
DNA (750bp) protein (250aa)
Putative oxidoreductase, SDR family n=1 Tax=Variovorax paradoxus B4 RepID=T1X4N3_VARPD
putative oxidoreductase, SDR family
Putative oxidoreductase, SDR family {ECO:0000313|EMBL:AGU47563.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_1295_curated_12
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12030..13694
DNA (1665bp) protein (555aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:AEH10313.1}; EC=6.2.1.3 {ECO:0000313|EMBL:AEH10313.1};; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
long-chain-fatty-acid--CoA ligase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC891
SCNpilot_cont_300_bf_scaffold_1295_curated_13
Hyphomonas sp. T16B2, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13713..14159
DNA (447bp) protein (149aa)
Thioesterase superfamily protein n=2 Tax=Sphingomonas aromaticivorans RepID=A4XDY8_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KCZ49297.1}; TaxID=1280941 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. T16B2.;"
thioesterase superfamily protein
SCNpilot_cont_300_bf_scaffold_1295_curated_14
Rhodococcus sp. EsD8, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14283..15953
DNA (1671bp) protein (557aa)
Cyclohexanone monooxygenase {ECO:0000313|EMBL:CCW13866.1}; EC=1.14.13.22 {ECO:0000313|EMBL:CCW13866.1};; TaxID=1301088 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. EsD8.;"
Cyclohexanone monooxygenase n=1 Tax=Rhodococcus sp. EsD8 RepID=N1MAD4_9NOCA
cyclohexanone monooxygenase
SCNpilot_cont_300_bf_scaffold_1295_curated_15
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16001..17080
DNA (1080bp) protein (360aa)
UPI0003D1C1D1 related cluster n=1 Tax=unknown RepID=UPI0003D1C1D1
Contig24, whole genome shotgun sequence {ECO:0000313|EMBL:ETA53249.2}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
NAD-dependent epimerase/dehydratase
SCNpilot_cont_300_bf_scaffold_1295_curated_16
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17077..17391
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SVA8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ETW97673.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1295_curated_17
Rhodococcus sp. EsD8, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17404..18195)
DNA (792bp) protein (264aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:CCW13873.1}; EC=4.2.1.17 {ECO:0000313|EMBL:CCW13873.1};; TaxID=1301088 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. EsD8.;"
crotonase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC894
enoyl-CoA hydratase/isomerase
SCNpilot_cont_300_bf_scaffold_1295_curated_18
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18213..18539)
DNA (327bp) protein (109aa)
CAIB/BAIF family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W863_9CAUL
CAIB/BAIF family {ECO:0000313|EMBL:EDX79521.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
l-carnitine dehydratase/bile acid-inducible protein f
Displaying 18 items

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