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SCNpilot_cont_300_bf_scaffold_722_curated_30

Organism: scnpilot_dereplicated_Rhizobiales_4

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 35801..36595

Top 3 Functional Annotations

Value Algorithm Source
polyamine ABC transporter permease n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003AAD9A1 similarity UNIREF
DB: UNIREF100
  • Identity: 39.7
  • Coverage: 242.0
  • Bit_score: 189
  • Evalue 3.90e-45
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:KFC75113.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.6
  • Coverage: 249.0
  • Bit_score: 189
  • Evalue 7.20e-45
binding-protein-dependent transport systems inner membrane component; K02053 putative spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 38.9
  • Coverage: 247.0
  • Bit_score: 185
  • Evalue 3.00e-44

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 795
ATGAGCCTCGTTAGCTGGCGGAGCCCGTTCGGGTTCGCGCTCTCGCTCGTGGCCGTGCTGGTGATCGCGTATATCATCGGGCCGCTGATCGTCATCGTCGGATCCTCGGTTGGCGGCGCCGGATACCTGTCCTTTCCCCCGGAGGGATTTTCGCTCCAGTGGTATTCGAAGCTGATACGCGAGCCGCTCTATCTGAACGGTTTCCTGACCAGTCTGCGGATCGCCTCCACTGTCACCCTCCTGTCGCTGCTGATCGGCATTCCCGCCGCCTACGCGCTGGCCTATCGCGGCTTCCGCGGCGCCTCGACGCTCGTCAGCATATTCCTGTCGCCGCTCATGCTGCCGAGCCTGGTGCTGGCCGTCGCGCTGACCATCTTCTTCTCGCACTGGCCGCTGACGACGGGCAACAACCGGCTGGTGCTGGCGCATCTGATCATCTGCATCCCCTGCGTGCTGCGGGTGACGATCCCGGCGTTCCAGCGGCTCGATCCGGCGCTGGAGGAGGCCGCTCTCAATCTCGGCGCGACGCCGCTCAAAGCCTTTCTGCTGGTCACGCTCCCCGTCGTGAAGTCGGGCTTCGCGGCGGCCGGCGCGCTCGCTTTCATCATGTCGTTCGACGAGTTCGACATGGCGCTGTTCCTCTCCGACCCCGCGCAGATGCCGCTGACGGTCGTTCTCTACACGAAAGCCCAGCTCGCCTTTGATCCGACGCTGGCCGCCGCCGCCTCAAGCCTCATCCTGATGATGCTTGTGCTGATGATCCTGGTTCAAATCGTGAGAATGCTTCGCGGATGA
PROTEIN sequence
Length: 265
MSLVSWRSPFGFALSLVAVLVIAYIIGPLIVIVGSSVGGAGYLSFPPEGFSLQWYSKLIREPLYLNGFLTSLRIASTVTLLSLLIGIPAAYALAYRGFRGASTLVSIFLSPLMLPSLVLAVALTIFFSHWPLTTGNNRLVLAHLIICIPCVLRVTIPAFQRLDPALEEAALNLGATPLKAFLLVTLPVVKSGFAAAGALAFIMSFDEFDMALFLSDPAQMPLTVVLYTKAQLAFDPTLAAAASSLILMMLVLMILVQIVRMLRG*