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SCNpilot_cont_300_bf_scaffold_3021_curated_13

Organism: scnpilot_dereplicated_Rhizobiales_4

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(8705..9274)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LHV9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 175.0
  • Bit_score: 174
  • Evalue 1.20e-40
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:KFC70509.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 188.0
  • Bit_score: 240
  • Evalue 2.50e-60
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 173.0
  • Bit_score: 171
  • Evalue 1.90e-40

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
TTGTCACTCGACGCTCTAGAAACGGACCTGCGCCCCATCTTCATCGCTGCGCTCGATGGGGACGCGATCGCGTATCGACGATTTCTCGACCTCATCGGACCGCGTCTGCGCGCCTTTCTTCGCGGACAGCTTGGGCGCGCGGGCGACCGCGATCACACCGAGGCGGAGGATGTGCTGCAGGAAACGCTGCTTGCGCTGCACCTGTCGCGGCATACCTATGATCGCGCCGCGCCCGTCTCCGCCTGGGCTTTCGCCATCGCGCGCTACAAGCTTGTGGACCATCTGAGGCGATCGCGTCGCCATACGGGCCACGCGCCGATCGAAGATGCCGAAGAGGCGCTGGCCGTCTCCGACAGCGGCGCGAGCGAGGCGCGCCTCGACCTCGGGCGGGCGCTTTCCAATCTGCCGGAGCGAACCCGGAATCTCATCGAGCAGGTGAAAATTCACGGCTCTACGATCGCGGAAGCCGCCTCCTCTGTGGGGATGACGGAAACCGCGGCGAAAGTCGCGATGCATCGCGGCCTCAAGGCGATGGCGAGAAGTTTGACCCGACGCCGAGCGCCGCCATGA
PROTEIN sequence
Length: 190
LSLDALETDLRPIFIAALDGDAIAYRRFLDLIGPRLRAFLRGQLGRAGDRDHTEAEDVLQETLLALHLSRHTYDRAAPVSAWAFAIARYKLVDHLRRSRRHTGHAPIEDAEEALAVSDSGASEARLDLGRALSNLPERTRNLIEQVKIHGSTIAEAASSVGMTETAAKVAMHRGLKAMARSLTRRRAPP*