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SCNpilot_cont_300_bf_scaffold_3021_curated

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3021_curated_1
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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551..1465
DNA (915bp) protein (305aa)
Putative phage integrase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z8K8_AZOL4
putative phage integrase
Putative phage integrase {ECO:0000313|EMBL:CBS87308.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
SCNpilot_cont_300_bf_scaffold_3021_curated_2
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1485..2282
DNA (798bp) protein (266aa)
UPI0003CDF202 related cluster n=1 Tax=unknown RepID=UPI0003CDF202
Uncharacterized protein {ECO:0000313|EMBL:ESY85799.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
SCNpilot_cont_300_bf_scaffold_3021_curated_3
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2934..3251
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WW90_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ35747.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_300_bf_scaffold_3021_curated_4
unknown

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3836..4060
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3021_curated_5
unknown

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4057..4281
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3021_curated_6
unknown

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4325..4612
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3021_curated_7
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4896..5987
DNA (1092bp) protein (364aa)
Phage capsid family protein {ECO:0000313|EMBL:AKI00547.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
SCNpilot_cont_300_bf_scaffold_3021_curated_8
unknown

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5987..6316
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3021_curated_9
unknown

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6313..6543
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3021_curated_10
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6540..7046
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VQF1_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJC75571.1}; Flags: Precursor;; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
SCNpilot_cont_300_bf_scaffold_3021_curated_11
unknown

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7034..7654
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI000368872F
SCNpilot_cont_300_bf_scaffold_3021_curated_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8026..8631)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LE98_BURGS
Uncharacterized protein {ECO:0000313|EMBL:KFC70508.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3021_curated_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8705..9274)
DNA (570bp) protein (190aa)
RNA polymerase sigma factor n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LHV9_9RHIZ
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:KFC70509.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_300_bf_scaffold_3021_curated_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9417..10259
DNA (843bp) protein (281aa)
Polyhydroxybutyrate depolymerase n=1 Tax=Pseudovibrio sp. (strain FO-BEG1) RepID=G8PQF1_PSEUV
Poly(3-hydroxybutyrate) depolymerase {ECO:0000313|EMBL:KFC70510.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
polyhydroxybutyrate depolymerase; K03932 polyhydroxybutyrate depolymerase
SCNpilot_cont_300_bf_scaffold_3021_curated_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10373..11566
DNA (1194bp) protein (398aa)
membrane protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000380B139
Acyltransferase 3 {ECO:0000313|EMBL:KFC70512.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
opgC; hypothetical protein
SCNpilot_cont_300_bf_scaffold_3021_curated_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11637..13022
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003819197
Uncharacterized protein {ECO:0000313|EMBL:KFC70513.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3021_curated_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13042..13527
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U3M9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KFC70514.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_300_bf_scaffold_3021_curated_18
unknown

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14405..14764
DNA (360bp) protein (120aa)

This feature has no annotations

Displaying 18 items

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