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SCNpilot_cont_300_bf_scaffold_3437_curated_11

Organism: scnpilot_dereplicated_Rhizobiales_4

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 9816..10394

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 184.0
  • Bit_score: 255
  • Evalue 1.30e-65
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4S0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 184.0
  • Bit_score: 265
  • Evalue 5.30e-68
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:AJP74795.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 187.0
  • Bit_score: 274
  • Evalue 9.40e-71

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
GTGAACCCGGTGCAGCTTGTTCCCTTGAAACGGCATGGCGACGATCGCGGCTGGTTCGCCGAGACCTACAGCCAGCGCGCCTTCGCGGCGCGGGGCCTGAGCGAGACCTACGTGCAGGACAATCATTCGCTGTCGCGCCAGGCGGGCGTCGTGAGAGGCCTCCATTTCCAGACTCCGCCGCACGGGCAGGCCAAGCTCGTTCGATGCGTCAGAGGTTCGATCTTCGATGTCGCGGTGGATGTGCGGCGCGGTTCGCCGACCTATGGCCGCTGGGTCGGCGCGGTTCTCTCGGCGGACAATGGCGACCAGCTCGCCATCCCGGTCGGCTTCGCGCATGGCTTCATGACGCTCGAGCCCGACACCGAGGTGATTTACAAGGTGACGGATTTCTACGCCCCCGCCCATGACGGCGGCCTGATCTGGAACGATCCCGCCATCGGCGTCGAATGGCCTGCGCCCGCCGCGCAGCCGATCCTGTCGCCGAAGGATCTCGCCCTCGGCCGCCTCGCCGACTTCGACAGTCCCTTTCCCTATGACGGCCGCCCGCTCGCGCCGCTCGTCAACCAATCCTCCGGCTGA
PROTEIN sequence
Length: 193
VNPVQLVPLKRHGDDRGWFAETYSQRAFAARGLSETYVQDNHSLSRQAGVVRGLHFQTPPHGQAKLVRCVRGSIFDVAVDVRRGSPTYGRWVGAVLSADNGDQLAIPVGFAHGFMTLEPDTEVIYKVTDFYAPAHDGGLIWNDPAIGVEWPAPAAQPILSPKDLALGRLADFDSPFPYDGRPLAPLVNQSSG*