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SCNpilot_cont_300_bf_scaffold_1410_curated_4

Organism: scnpilot_dereplicated_Rhizobiales_4

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 3345..3713

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Methylocystis parvus RepID=UPI000316EECA similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 121.0
  • Bit_score: 197
  • Evalue 6.70e-48
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 118.0
  • Bit_score: 188
  • Evalue 9.70e-46
Transcriptional regulator TetR family {ECO:0000313|EMBL:ACM35470.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 118.0
  • Bit_score: 188
  • Evalue 4.30e-45

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Taxonomy

Agrobacterium vitis → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
TTGGCGGACCGCATCCGCAGCTTCATCCACCTTCTGATCGCGAATGGCGCAAAGATCACGGCTCATGGCTGTCCGGTCGGCACGCTCTGCAACGAGCTGGCGAAGCTCGATCACGCTGCCAAGGCCGATGCGGCAGGACTGTTCTCGCTGTTCCGCGACTGGCTTGCCCGGCAGTTTATCGCGTTGGGTCGTGAGAGCGATGCCGATCCGCTGGCGCTTCATCTCCTGATGCGCAGTCAGGGCGTTGCGACGCTCGCCACCGCTTTCCGCGACGAGGATTTCATCCGCCGCGAGGTCGCCGACATGGAGGCATGGCTGCTCGTCCAATGCCCGGTCGCGTCATTCACCCGATCCCACCTATCCGCCTGA
PROTEIN sequence
Length: 123
LADRIRSFIHLLIANGAKITAHGCPVGTLCNELAKLDHAAKADAAGLFSLFRDWLARQFIALGRESDADPLALHLLMRSQGVATLATAFRDEDFIRREVADMEAWLLVQCPVASFTRSHLSA*