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SCNpilot_cont_300_bf_scaffold_1015_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_4

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(2539..3444)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Pseudomonas fuscovaginae RepID=UPI00028949B1 similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 284.0
  • Bit_score: 384
  • Evalue 7.20e-104
ABC transporter permease {ECO:0000313|EMBL:KIZ51773.1}; TaxID=47885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas oryzihabitans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 284.0
  • Bit_score: 400
  • Evalue 1.80e-108
tauC; sulfonate/nitrate/taurine transport system permease protein; K02050 NitT/TauT family transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 304.0
  • Bit_score: 352
  • Evalue 1.60e-94

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Taxonomy

Pseudomonas oryzihabitans → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGGCTGACGTGATTCATGCGCCCCGGGGCAGGGCTCTCTTCAAGGAGCTTCCGGCGCGCCCGAGCATCGACCGGACGACGCTGGACTCCGCCGCCATCGGCGAGATCGCGCGCGATGTCGGATTCTGGCGGCGCTGCTGGTCATACACTCCGTTGCGCCGCTTTCTCGTTCTCGTGTTTCTCGGCTGCGCCTGGGAAATCTATGCCCGGCTCGCCGGAAATCCGCTGATGTTTCCCTCGCTCAGCGACACGCTCGTCGCCTGGGCGACGGACATCGCAAACGGAACGCTGACCTCCGCCGTATGGACGTCCCTTCGCATTCTCGTGCTCGGCTATGGCGTCGCCGTGCTGCTGGCCGCGGTCCTCACGACGCTCGCGATCTCGACCCGCATCGGCACTGATCTGCTCGCGACGCTGACCGCGATGTTCAACCCGCTGCCGGCGATCGCCATTCTTCCGCTGGCGCTGCTGTGGTTCGGGCTCGGCGTTCAGAGTTTGATTTTCGTGATCGTGCATTCCGTGCTCTGGGCCGTGTCGCTCAACACCTTCACCGGATTTCTCTCGGTGAGCCAGACGCAGCGCATGGTCGGGCGCAATTACGGACTTGGCGGTTTGCGCCTTGTGACTCACATCCTCATCCCCGCGGCCTTCCCGTCGATCCTCGCCGGTCTGAAGATCGGCTGGGCTTTCGCGTGGCGCACCCTGATCGCGGCTGAACTGGTGTTTGGCGTCTCGGGCGATTCCGCCGGCCTTGGCTGGTATATCTTCCAGAACCGCAACGCGCTCGAAACCGCGCATGTGTTCGCCGGCCTCTTCACCGTCATCATCATCGGCCTCGTCATCGAGGGCGTCGTGTTCCGCTCCATCGAGGCGGCGACAGTGCGGCGCTGGGGCATGCAGGCGTAG
PROTEIN sequence
Length: 302
MADVIHAPRGRALFKELPARPSIDRTTLDSAAIGEIARDVGFWRRCWSYTPLRRFLVLVFLGCAWEIYARLAGNPLMFPSLSDTLVAWATDIANGTLTSAVWTSLRILVLGYGVAVLLAAVLTTLAISTRIGTDLLATLTAMFNPLPAIAILPLALLWFGLGVQSLIFVIVHSVLWAVSLNTFTGFLSVSQTQRMVGRNYGLGGLRLVTHILIPAAFPSILAGLKIGWAFAWRTLIAAELVFGVSGDSAGLGWYIFQNRNALETAHVFAGLFTVIIIGLVIEGVVFRSIEAATVRRWGMQA*