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SCNpilot_expt_1000_bf_scaffold_10042_curated

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10042_curated_1
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..355
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P3G9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF41936.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10042_curated_2
unknown

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comp(478..726)
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10042_curated_3
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1119..2027)
DNA (909bp) protein (303aa)
RNA polymerase sigma 70 n=5 Tax=Mesorhizobium RepID=V7EXF3_9RHIZ
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
RNA polymerase sigma-32 subunit RpoH; K03089 RNA polymerase sigma-32 factor
SCNpilot_expt_1000_bf_scaffold_10042_curated_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2236..3264)
DNA (1029bp) protein (343aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Pseudouridine synthase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T7F8_MESCW
SCNpilot_expt_1000_bf_scaffold_10042_curated_5
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3285..3668
DNA (384bp) protein (128aa)
UPI0003CF1B0E related cluster n=1 Tax=unknown RepID=UPI0003CF1B0E
Fimbrial protein {ECO:0000313|EMBL:ESY92671.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
fimbrial subunit PilA
SCNpilot_expt_1000_bf_scaffold_10042_curated_6
unknown

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comp(4694..4861)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10042_curated_7
unknown

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comp(5132..5572)
DNA (441bp) protein (147aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10042_curated_8
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6524..6904
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003703D3C
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:KFB08863.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
PAS/PAC sensor hybrid histidine kinase
Displaying 8 items

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