name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_3454_curated_1
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
669..929
|
id=24535675 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Uncharacterised protein {ECO:0000313|EMBL:CRD98918.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3454_curated_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1018..2142)
|
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi C
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTI0_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_3454_curated_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2150..3292)
|
Cell division protein FtsW n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTI1_9RHIZ
Cell division protein FtsW {ECO:0000313|EMBL:EHK55959.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
cell division protein FtsW; K03588 cell division protein FtsW
|
|
SCNpilot_expt_1000_bf_scaffold_3454_curated_4
Mesorhizobium sp. LNJC372A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3292..4260)
|
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC372A00.;"
UDP-N-acetylmuramoylalanine/D-glutamate ligase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
UPI0003CF2214 related cluster n=1 Tax=unknown RepID=UPI0003CF2214
|
|
SCNpilot_expt_1000_bf_scaffold_3454_curated_5
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4661..5743)
|
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
phospho-N-acetylmuramoyl-pentapeptide-transferase; K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031845A1
|
|
SCNpilot_expt_1000_bf_scaffold_3454_curated_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5767..7191)
|
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
rbh
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTI4_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_3454_curated_7
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7188..7568)
|
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208};
UDP-N-acetylmuramyl-tripeptide synthetase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
UPI0003CE238D related cluster n=1 Tax=unknown RepID=UPI0003CE238D
|
|
SCNpilot_expt_1000_bf_scaffold_3454_curated_8
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8007..8750
|
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
|
|
SCNpilot_expt_1000_bf_scaffold_3454_curated_9
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8668..10389)
|
peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129]
Penicillin-binding protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YEW7_9RHIZ
Penicillin-binding protein {ECO:0000313|EMBL:EHH09777.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3454_curated_10
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10386..10772)
|
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036E63FC
Uncharacterized protein {ECO:0000313|EMBL:EIM72165.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3454_curated_11
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10769..11785)
|
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
S-adenosyl-methyltransferase MraW; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
16S rRNA methyltransferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000312AD30
|
|
SCNpilot_expt_1000_bf_scaffold_3454_curated_12
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11782..12246)
|
Protein MraZ n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BRG1_9RHIZ
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
cell division protein MraZ; K03925 MraZ protein
|
|
SCNpilot_expt_1000_bf_scaffold_3454_curated_13
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12629..12844)
|
Plasmid stabilization system protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KL11_MESAW
plasmid stabilization system protein
Plasmid stabilization system protein {ECO:0000313|EMBL:AGB45776.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
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SCNpilot_expt_1000_bf_scaffold_3454_curated_14
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12928..13188)
|
UPI0003D03280 related cluster n=1 Tax=unknown RepID=UPI0003D03280
Addiction module antitoxin {ECO:0000313|EMBL:ESZ20293.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
putative addiction module antidote protein, CC2985 family
|
|
SCNpilot_expt_1000_bf_scaffold_3454_curated_15
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13739..14326)
|
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000364927C
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:EKF20793.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
lytic transglycosylase catalytic subunit
|
|
SCNpilot_expt_1000_bf_scaffold_3454_curated_16
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14494..15258)
|
Mll1570 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98KA2_RHILO
Mll1570 protein {ECO:0000313|EMBL:BAB48912.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
|
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SCNpilot_expt_1000_bf_scaffold_3454_curated_17
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15255..15965)
|
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MF88_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF20791.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
DnaJ-like protein; K05801 DnaJ like chaperone protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3454_curated_18
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16053..16571)
|
Beta-lactamase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTK3_9RHIZ
Beta-lactamase {ECO:0000313|EMBL:CDX19424.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
beta-lactamase
|
|
SCNpilot_expt_1000_bf_scaffold_3454_curated_19
unknown
|
Not on your lists |
16885..17292
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3454_curated_20
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17603..18391
|
Glycoside hydrolase family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTK4_9RHIZ
Glycoside hydrolase family protein {ECO:0000313|EMBL:EHK55982.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
glycoside hydrolase family protein; K07273 lysozyme
|
|
SCNpilot_expt_1000_bf_scaffold_3454_curated_21
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18429..19607
|
UPI0003CED08E related cluster n=1 Tax=unknown RepID=UPI0003CED08E
Lytic transglycosylase {ECO:0000313|EMBL:ESY75893.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
transglycosylase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3454_curated_22
unknown
|
Not on your lists |
19669..19749
|
This feature has no annotations |