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SCNpilot_expt_1000_bf_scaffold_2416_curated

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2416_curated_1
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..913
DNA (912bp) protein (304aa)
Myo-inositol-1-phosphate synthase n=1 Tax=Rhizobium sp. RepID=L0NBY0_RHISP
Myo-inositol-1-phosphate synthase {ECO:0000313|EMBL:CCF18301.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
myo-inositol-1-phosphate synthase
SCNpilot_expt_1000_bf_scaffold_2416_curated_2
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(906..1694)
DNA (789bp) protein (263aa)
Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:CCF18306.1}; EC=2.3.1.51 {ECO:0000313|EMBL:CCF18306.1};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Rhizobium sp. RepID=L0NBY5_RHISP
SCNpilot_expt_1000_bf_scaffold_2416_curated_3
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1852..2130
DNA (279bp) protein (93aa)
Putative Acyl carrier protein n=1 Tax=Rhizobium sp. RepID=L0NDC5_RHISP
Putative Acyl carrier protein {ECO:0000313|EMBL:CCF18307.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
acyl carrier protein
SCNpilot_expt_1000_bf_scaffold_2416_curated_4
unknown

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comp(2441..2788)
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2416_curated_5
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2889..3284
DNA (396bp) protein (132aa)
Beta-ketoacyl synthase {ECO:0000313|EMBL:CCF18308.1}; EC=2.3.1.- {ECO:0000313|EMBL:CCF18308.1};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
Beta-ketoacyl synthase n=1 Tax=Rhizobium sp. RepID=L0NB45_RHISP
beta-ketoacyl synthase
SCNpilot_expt_1000_bf_scaffold_2416_curated_6
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3597..4007
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NBQ3_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF18309.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
SCNpilot_expt_1000_bf_scaffold_2416_curated_7
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4004..4399)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NB74_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF18310.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
SCNpilot_expt_1000_bf_scaffold_2416_curated_8
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4426..5274)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NBY9_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF18311.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2416_curated_9
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5276..6055)
DNA (780bp) protein (260aa)
Putative Glycoside transferase family 32 n=1 Tax=Rhizobium sp. RepID=L0NDD0_RHISP
Putative Glycoside transferase family 32 {ECO:0000313|EMBL:CCF18312.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2416_curated_10
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6212..6979
DNA (768bp) protein (256aa)
Putative CDP-diacylglycerol inositol 3-phosphatidyltransferase {ECO:0000313|EMBL:CCF18314.1}; EC=2.7.8.11 {ECO:0000313|EMBL:CCF18314.1};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
Putative CDP-diacylglycerol inositol 3-phosphatidyltransferase n=1 Tax=Rhizobium sp. RepID=L0NBQ7_RHISP
conserved membrane protein of unknown function
SCNpilot_expt_1000_bf_scaffold_2416_curated_11
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6976..7488
DNA (513bp) protein (171aa)
Phosphatidylglycerophosphatase A {ECO:0000256|PIRNR:PIRNR006162}; EC=3.1.3.27 {ECO:0000256|PIRNR:PIRNR006162, ECO:0000313|EMBL:CCF18315.1};; Phosphatidylglycerolphosphate phosphatase A {ECO:0000256|PIRNR:PIRNR006162}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
phosphatidylglycerophosphatase (EC:3.1.3.27); K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27]
Phosphatidylglycerophosphatase n=1 Tax=Rhizobium sp. RepID=L0NB77_RHISP
SCNpilot_expt_1000_bf_scaffold_2416_curated_12
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7494..8234
DNA (741bp) protein (247aa)
Putative Polysaccharide deacetylase n=1 Tax=Rhizobium sp. RepID=L0NBZ3_RHISP
Putative Polysaccharide deacetylase {ECO:0000313|EMBL:CCF18316.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
putative xylanase/chitin deacetylase
SCNpilot_expt_1000_bf_scaffold_2416_curated_13
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8192..9355)
DNA (1164bp) protein (388aa)
Putative N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein {ECO:0000313|EMBL:CCF18317.1}; EC=2.4.1.198 {ECO:0000313|EMBL:CCF18317.1};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
Putative N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein n=1 Tax=Rhizobium sp. RepID=L0NDD5_RHISP
group 1 glycosyl transferase
SCNpilot_expt_1000_bf_scaffold_2416_curated_14
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9526..11421
DNA (1896bp) protein (632aa)
Uncharacterized protein n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MRP4_PSEPS
Uncharacterized protein {ECO:0000313|EMBL:ELS28723.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes KF707.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2416_curated_15
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11441..12241
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NB63_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF18295.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2416_curated_16
unknown

Not on your lists

comp(12908..13333)
DNA (426bp) protein (142aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2416_curated_17
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13768..15042
DNA (1275bp) protein (425aa)
Putative Coenzyme a synthetase-like protein n=1 Tax=Rhizobium sp. RepID=L0NBN6_RHISP
Putative Coenzyme a synthetase-like protein {ECO:0000313|EMBL:CCF18294.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2416_curated_18
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15046..15801)
DNA (756bp) protein (252aa)
Putative Cytochrome P450 {ECO:0000313|EMBL:CCF18293.1}; EC=1.14.-.- {ECO:0000313|EMBL:CCF18293.1};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
Putative Cytochrome P450 n=1 Tax=Rhizobium sp. RepID=L0NB33_RHISP
pksS; polyketide biosynthesis cytochrome P450 PksS
SCNpilot_expt_1000_bf_scaffold_2416_curated_19
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15768..16313)
DNA (546bp) protein (182aa)
Putative Cytochrome P450 {ECO:0000313|EMBL:CCF18293.1}; EC=1.14.-.- {ECO:0000313|EMBL:CCF18293.1};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
Putative Cytochrome P450 n=1 Tax=Rhizobium sp. RepID=L0NB33_RHISP
cytochrome P450
SCNpilot_expt_1000_bf_scaffold_2416_curated_20
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16288..17427)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NDB2_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF18292.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
SCNpilot_expt_1000_bf_scaffold_2416_curated_21
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17586..18116)
DNA (531bp) protein (177aa)
membrane protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035FF3E6
BA14K-like protein {ECO:0000313|EMBL:AJC78160.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
BA14K family protein
SCNpilot_expt_1000_bf_scaffold_2416_curated_22
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18294..18848
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M4H0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF16961.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2416_curated_23
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19020..21299
DNA (2280bp) protein (760aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F28E7
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EHH10848.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
AMP-dependent synthetase and ligase
Displaying 23 items

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