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SCNpilot_expt_1000_bf_scaffold_2941_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2941_curated_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..896)
DNA (894bp) protein (298aa)
FAD linked oxidase domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTD8_9RHIZ
FAD linked oxidase domain-containing protein {ECO:0000313|EMBL:EHK55916.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
FAD/FMN-dependent dehydrogenase
SCNpilot_expt_1000_bf_scaffold_2941_curated_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1021..1503
DNA (483bp) protein (161aa)
hypothetical protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTD9_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK55917.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_expt_1000_bf_scaffold_2941_curated_3
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1487..2302)
DNA (816bp) protein (272aa)
Uncharacterized protein {ECO:0000313|EMBL:CDX38847.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
SCNpilot_expt_1000_bf_scaffold_2941_curated_4
Mesorhizobium sp. LSHC422A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2505..2735
DNA (231bp) protein (77aa)
PAS sensor protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HK45_9RHIZ
PAS sensor protein {ECO:0000313|EMBL:ESX60871.1}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;"
PAS domain S-box
SCNpilot_expt_1000_bf_scaffold_2941_curated_5
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2739..3176
DNA (438bp) protein (146aa)
UPI0003CDE3C8 related cluster n=1 Tax=unknown RepID=UPI0003CDE3C8
Response regulator {ECO:0000313|EMBL:ESZ16651.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
response regulator of citrate/malate metabolism
SCNpilot_expt_1000_bf_scaffold_2941_curated_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3196..4083)
DNA (888bp) protein (296aa)
twin-arginine translocation pathway signal; K01061 carboxymethylenebutenolidase [EC:3.1.1.45]
Twin-arginine translocation pathway signal n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTE2_9RHIZ
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:EHK55920.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_expt_1000_bf_scaffold_2941_curated_7
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4271..4684
DNA (414bp) protein (138aa)
Putative transcriptional regulator protein, MerR family n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3M8I3_RHISN
putative transcriptional regulator protein, MerR family
Putative transcriptional regulator protein, MerR family {ECO:0000313|EMBL:ACP24529.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCNpilot_expt_1000_bf_scaffold_2941_curated_8
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4913..5452)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000378F68D
Putative glyoxalase {ECO:0000313|EMBL:EIM76200.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2941_curated_9
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5700..7292
DNA (1593bp) protein (531aa)
multi-sensor signal transduction histidine kinase (EC:3.1.1.61)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI0002F1250B
Signal transduction histidine kinase {ECO:0000313|EMBL:KFB09104.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
SCNpilot_expt_1000_bf_scaffold_2941_curated_10
Mesorhizobium sp. LNJC391B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7345..10068
DNA (2724bp) protein (908aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1287273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC391B00.;"
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
UPI0003CE7C3E related cluster n=1 Tax=unknown RepID=UPI0003CE7C3E
SCNpilot_expt_1000_bf_scaffold_2941_curated_11
Fulvimarina pelagi, Fulvimarina, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10358..10648)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G5D9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EAU43125.1}; TaxID=314231 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Fulvimarina.;" source="Fulvimarina pelagi HTCC2506.;"
hypothetical protein; K07461 putative endonuclease
Displaying 11 items

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