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SCNpilot_expt_1000_bf_scaffold_5834_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5834_curated_1
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..212)
DNA (210bp) protein (70aa)
hypothetical protein; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4]
Myo-inositol-1-phosphate synthase n=1 Tax=Rhizobium sp. RepID=L0NBY0_RHISP
Myo-inositol-1-phosphate synthase {ECO:0000313|EMBL:CCF18301.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
SCNpilot_expt_1000_bf_scaffold_5834_curated_2
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(265..1626)
DNA (1362bp) protein (454aa)
Polysaccharide ABC transporter, ATP-binding protein n=1 Tax=Rhizobium sp. RepID=L0NB67_RHISP
Polysaccharide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CCF18300.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
Polysaccharide ABC transporter, ATP-binding component; K09691 lipopolysaccharide transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_5834_curated_3
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1613..2902)
DNA (1290bp) protein (430aa)
Putative ABC O-antigen/lipopolysaccharide exporter, ATPase subunit n=1 Tax=Rhizobium sp. RepID=L0NBP2_RHISP
Putative ABC O-antigen/lipopolysaccharide exporter, ATPase subunit {ECO:0000313|EMBL:CCF18299.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
Polysaccharide ABC transporter, ATP-binding component; K09691 lipopolysaccharide transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_5834_curated_4
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2892..3716)
DNA (825bp) protein (275aa)
Putative ABC O-antigen/lipopolysaccharide exporter, innermembrane subunit n=1 Tax=Rhizobium sp. RepID=L0NB38_RHISP
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hypothetical protein; K09690 lipopolysaccharide transport system permease protein
SCNpilot_expt_1000_bf_scaffold_5834_curated_5
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3843..5183
DNA (1341bp) protein (447aa)
Putative Lipopolysaccharide N-acetylglucosaminyltransferase II n=1 Tax=Rhizobium sp. RepID=L0NDB6_RHISP
Putative Lipopolysaccharide N-acetylglucosaminyltransferase II {ECO:0000313|EMBL:CCF18297.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
lipopolysaccharide N-acetylglucosaminyltransferase I
SCNpilot_expt_1000_bf_scaffold_5834_curated_6
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5194..6360)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NB41_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF18303.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
SCNpilot_expt_1000_bf_scaffold_5834_curated_7
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7193..8455)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NBP8_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF18304.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
SCNpilot_expt_1000_bf_scaffold_5834_curated_8
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8547..9206)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KQ98_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPC02653.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
GntR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_5834_curated_9
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9605..11077
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037B2ECD
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ERI32920.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;"
ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_5834_curated_10
Jannaschia aquimarina, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11171..12028
DNA (858bp) protein (286aa)
Binding-protein-dependent transport system inner membrane component family protein 4 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T014_ALCXX
GsiC_4 protein {ECO:0000313|EMBL:KIT15089.1}; TaxID=935700 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia aquimarina.;"
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
Displaying 10 items

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