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SCNpilot_expt_1000_bf_scaffold_5115_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5115_curated_1
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(80..529)
DNA (450bp) protein (150aa)
Transcriptional regulator, MarR family n=1 Tax=Rhodovulum sp. PH10 RepID=J6LLK0_9RHOB
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EJW13538.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
SCNpilot_expt_1000_bf_scaffold_5115_curated_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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686..1915
DNA (1230bp) protein (410aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q210L7_RHOPB
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABD89169.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_expt_1000_bf_scaffold_5115_curated_3
unknown

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2049..2417
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5115_curated_4
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2511..2930
DNA (420bp) protein (140aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Thioesterase superfamily n=1 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GFI5_RUEST
Thioesterase superfamily protein {ECO:0000313|EMBL:KHQ50840.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
SCNpilot_expt_1000_bf_scaffold_5115_curated_5
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2938..3996)
DNA (1059bp) protein (353aa)
Glycoside hydrolase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LT47_9RHIZ
Glycoside hydrolase {ECO:0000313|EMBL:EKF20959.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
glycosyl hydrolase family protein; K07273 lysozyme
SCNpilot_expt_1000_bf_scaffold_5115_curated_6
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4138..4698
DNA (561bp) protein (187aa)
PfpI family intracellular peptidase; K05520 protease I [EC:3.2.-.-]
Intracellular protease, PfpI family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11I95_MESSB
Intracellular protease, PfpI family {ECO:0000313|EMBL:ABG62880.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_expt_1000_bf_scaffold_5115_curated_7
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4812..4973
DNA (162bp) protein (54aa)
Uncharacterized protein n=7 Tax=Rhizobium meliloti RepID=F6C1D3_SINMB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG71292.1}; TaxID=1286640 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain Sm2011 / Rm2011 / 2011).;"
SCNpilot_expt_1000_bf_scaffold_5115_curated_8
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(4979..5911)
DNA (933bp) protein (311aa)
lactate 2-monooxygenase; K00467 lactate 2-monooxygenase [EC:1.13.12.4]
Glycolate oxidase {ECO:0000313|EMBL:ABF44928.1}; EC=1.13.12.4 {ECO:0000313|EMBL:ABF44928.1};; TaxID=319795 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus geothermalis (strain DSM 11300).;"
Glycolate oxidase n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1J0Q6_DEIGD
SCNpilot_expt_1000_bf_scaffold_5115_curated_9
unknown

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6510..6578
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 9 items

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