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SCNpilot_expt_1000_bf_scaffold_2007_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2007_curated_1
bacterium YEK0313, Bacteria

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1..594
DNA (594bp) protein (198aa)
aryldialkylphosphatase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B738C4
Uncharacterized protein {ECO:0000313|EMBL:CEJ10237.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
aryldialkylphosphatase; K07048 phosphotriesterase-related protein
SCNpilot_expt_1000_bf_scaffold_2007_curated_2
bacterium YEK0313, Bacteria

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609..1937
DNA (1329bp) protein (443aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
Beta-transaminase n=1 Tax=Mesorhizobium sp. LUK RepID=A3EYF7_9RHIZ
Beta-phenylalanine transaminase {ECO:0000313|EMBL:CEJ10236.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_expt_1000_bf_scaffold_2007_curated_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1970..2716
DNA (747bp) protein (249aa)
ygfF; oxidoreductase YgfF (EC:1.-.-.-)
Glucose-1-dehydrogenase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TXI6_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
SCNpilot_expt_1000_bf_scaffold_2007_curated_4
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2751..3677
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G287_ACICJ
3-keto-5-aminohexanoate cleavage protein {ECO:0000313|EMBL:KGM31941.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2007_curated_5
Paenibacillus sp. OTK, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3681..6392)
DNA (2712bp) protein (904aa)
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase (EC:3.2.1.40)
alpha-L-rhamnosidase n=1 Tax=Oceanicola sp. S124 RepID=UPI0002558A0C
Rhamnosidase B {ECO:0000313|EMBL:BAN04698.1}; TaxID=1230468 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. OTK.;"
SCNpilot_expt_1000_bf_scaffold_2007_curated_6
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6460..7290)
DNA (831bp) protein (277aa)
Maltose transport protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AYU6_STRRD
maltose transporter; K10119 multiple sugar transport system permease protein
Maltose transport protein {ECO:0000313|EMBL:ACZ90883.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_expt_1000_bf_scaffold_2007_curated_7
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7283..8242)
DNA (960bp) protein (320aa)
ABC transporter, permease protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AYU7_STRRD
ABC transporter permease; K10118 multiple sugar transport system permease protein
ABC transporter, permease protein {ECO:0000313|EMBL:ACZ90884.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_expt_1000_bf_scaffold_2007_curated_8
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(8253..9524)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2N8S9_9ACTO
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIF78513.1}; TaxID=1576605 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
extracellular solute-binding protein family 1 protein; K10117 multiple sugar transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_2007_curated_9
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9626..10357)
DNA (732bp) protein (244aa)
Transcriptional regulator, GntR family n=1 Tax=Rhizobium sp. RepID=L0NK07_RHISP
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CCF21438.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
GntR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_2007_curated_10
Halomonas sp. HAL1, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10354..11772)
DNA (1419bp) protein (473aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000366976C
Uncharacterized protein {ECO:0000313|EMBL:EHA14260.1}; TaxID=550984 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. HAL1.;"
hypothetical protein
Displaying 10 items

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