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SCNpilot_expt_1000_bf_scaffold_8209_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8209_curated_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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182..859
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NEV6_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29147.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
GntR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_8209_curated_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(875..2023)
DNA (1149bp) protein (383aa)
ABC transporter; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30]
Spermidine/putrescine ABC transporter ATPase subunit n=1 Tax=sediment metagenome RepID=D9PHC0_9ZZZZ
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
SCNpilot_expt_1000_bf_scaffold_8209_curated_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2020..3810)
DNA (1791bp) protein (597aa)
binding-protein-dependent transport system inner membrane protein; K02011 iron(III) transport system permease protein id=14631202 bin=bin9_gal15 species=Pseudomonas agarici genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
ABC transporter permease; K02011 iron(III) transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
SCNpilot_expt_1000_bf_scaffold_8209_curated_4
unknown

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comp(3897..4091)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8209_curated_5
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5262..6041)
DNA (780bp) protein (260aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
transketolase; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1]
UPI0003CFE47C related cluster n=1 Tax=unknown RepID=UPI0003CFE47C
SCNpilot_expt_1000_bf_scaffold_8209_curated_6
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6071..6538)
DNA (468bp) protein (156aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
transketolase; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1]
UPI0003CE3A26 related cluster n=1 Tax=unknown RepID=UPI0003CE3A26
Displaying 6 items

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