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SCNpilot_expt_1000_bf_scaffold_2814_curated_18

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: comp(17518..18807)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CID3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 424.0
  • Bit_score: 696
  • Evalue 2.10e-197
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:EYR83125.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 424.0
  • Bit_score: 696
  • Evalue 2.90e-197
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 425.0
  • Bit_score: 497
  • Evalue 4.50e-138

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1290
ATGACAGCTCGAAATGGAAGCATGCCGGGACTCAACCGCCGGGCGTTCCTGGCGGCCGCCACGACGGCGCTCGCCGCGCCGGTCGTCCTGCGCCATTCGCGCGCCTATGCGCAGACGCCGACGCTGAAGATCGGCCATGTCAGCCCGCGCACCGGGCCGCTGGCCGGCTTCGCCGAGGCCGACGACTACATCCTCGATGGCGTCGCCAGGGCTTACGGCAAGGGCATCGAGAACAACGGCAAGAGCTGGGCCGTCGAGATCATCTCGAAGGACAGCCAGTCGAACCCCAACCGTGCCGCCGAAGTCGCCTCCGAGCTGATCCTCAAGGACGAGGTCGACATCATCGTCGCCGCCTCGACGCCGGACACGGTCAATCCCGTCTCCGACCAGGCCGAGGTCAACGGCACGCCCTGCGTCACTACCGACTGCCCGTGGCAGCCCTATTTCTTCGGCCGCAACGGCGCGCCCGACACCGGCTTCCAGTCCACCTACCATTTCTTCTGGGGCCTGGAGGACGTCATCGCCTCGTTCCTCGCCATGTGGAACCATGACGGCGTGGCGAAGAAGGTCGGCGGCCTGTTCCCCAACGACGCCGACGGAAATGCCTGGGGCGATGCCGAGCGCGGCTTCCCCAAGCCGCTCGCGGAAGCCGGCTTCGCGCTCACCGATCCCGGCCGCTACCAGCCGCTGACCGACAATTTCACCGCGCAGATCTCCGCCTTCAAGGGCGCCGGCGCCGAGATCGTCACCGGCAACATGATCCCGCCGGACTTCGCCACCTTCTGGAGCCAGGCCGGCCAGCAGGGTTTTCGGCCGAAGATCGTCACCATCGGCAAGGCGCTGCTGTTCCCCTCCGTCATCGCCTCGCTCGGCGATCGCGGCGTCGGCCTCTCCTCCGAGATCTGGTGGACGCCGGACCATCCGTTCAAGTCGAGCCTGACCGGCGACAGCGCGCGCCAGCTCGCGGAAGGCTATTCGGCCGCCACCGGCCGCCCGTGGACGCAGCCGATCGGCTTCAAGCACGCGCTGTTCGAGGTGGTCGCCGACGTGGTGAAGCGCAGCGGCGACCTGGAGGACCCCGAGGCGATCGTCGCGGCGATCCGCGCCACCTCGCTGCCCACCATCGTCGGCCCGGTCGACTGGTCGAAGGGCCCGGTGAAGAACGTCACCAAGACGCCGCTCGTCGCCGGCCAGTGGCAGAAGCGCGGCGGCAAGGTCGAGCTGGTCGTCACCACCAACGCCAACGCGCCGGAGATCCCGGTCGGCGGCGACCTCGTCCTGCTGTCGTGA
PROTEIN sequence
Length: 430
MTARNGSMPGLNRRAFLAAATTALAAPVVLRHSRAYAQTPTLKIGHVSPRTGPLAGFAEADDYILDGVARAYGKGIENNGKSWAVEIISKDSQSNPNRAAEVASELILKDEVDIIVAASTPDTVNPVSDQAEVNGTPCVTTDCPWQPYFFGRNGAPDTGFQSTYHFFWGLEDVIASFLAMWNHDGVAKKVGGLFPNDADGNAWGDAERGFPKPLAEAGFALTDPGRYQPLTDNFTAQISAFKGAGAEIVTGNMIPPDFATFWSQAGQQGFRPKIVTIGKALLFPSVIASLGDRGVGLSSEIWWTPDHPFKSSLTGDSARQLAEGYSAATGRPWTQPIGFKHALFEVVADVVKRSGDLEDPEAIVAAIRATSLPTIVGPVDWSKGPVKNVTKTPLVAGQWQKRGGKVELVVTTNANAPEIPVGGDLVLLS*