ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6783_curated_13

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: 11933..12967

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 323.0
  • Bit_score: 506
  • Evalue 3.40e-140
tRNA-dihydrouridine synthase A; K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 327.0
  • Bit_score: 500
  • Evalue 3.20e-139
  • rbh
tRNA-dihydrouridine synthase A n=2 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G074_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 323.0
  • Bit_score: 506
  • Evalue 2.50e-140

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LNJC394B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
TTGAATCAGTCTGGCAGCAGCATCGGCTATCGCATTGGCCCGGCGGGACGAAATGTCGTCGCCGCGCCGGTGTTCGCCGTCGCGCCGATGATGGACTGGACGGACCGGCACTGCCGCTTCTTCCATCGCCGGCTCACGTGCGAGGCGCTGCTCTACACCGAGATGGTGGTCGCCGACGCGGCGATCCACGGGCCGCGCGAGCGGCTGCTCGGCTTCGACGCCGGCGAGCATCCGGTCGCCCTGCAGCTCGGCGGCTCGGAGCCGGGCAAGCTCGCCGAGGCGGCGCGCATCGGCGCTGGCTTCGGTTATGACGAGATCAACCTGAACGTCGGCTGCCCGTCCGACCGCGTTCAGTCGGGCACGTTCGGCGCCTGCCTGATGCGCACGCCGGAGCTGGTCGCCGATTGCGTTTCGGCGATGAAGCGGGCGACCGACCTGCCGGTGACGGTGAAGTGCCGCATCGGCGTCGACGACCAGGACCCGGAGGCAGCACTTGACGCGGTGGCCGATCTCGTCTTCGCGGCCGGCGCCGACGCGCTCTGGGTGCACGCGCGAAAAGCCTGGCTCCAGGGCCTGAGCCCGAAGGAGAACCGCGAGATCCCGCCGCTCGACTATCCGCGCGTCTACCGGCTGAAGGCGAAGCACGCCGGCCGCTTCGTCGGCATCAATGGCGGCATCCAGACGCTCGCCGAGGCGCGCGCGCATCTGGATTCCGTCGATGGCGTCATGCTCGGCCGCGCCGCCTACCACAACCCGCGCATGCTCGCCGGCATCGACCGGCCGGACGGAGAGGGCGACGTCGACCTCGCCGCGATCGTCGATGCGATGAAGGATTACGCCGCCCGCCATATCGAGCGCGGCGGCCGGCTCGCCCACGTTAGCCGCCACATGACCGGCCTGATGCACGGTCTGCCGGGCGCCCGGCGTTTCCGGCAGATCCTCTCGACCGACGCGGCGCGGCCCGGCGCCGGCCCGGAGGTGCTCGACCACGCGTTCGCCGAGGCCATGCAGGCAGCCGCCGATCAGGCGGCCTGA
PROTEIN sequence
Length: 345
LNQSGSSIGYRIGPAGRNVVAAPVFAVAPMMDWTDRHCRFFHRRLTCEALLYTEMVVADAAIHGPRERLLGFDAGEHPVALQLGGSEPGKLAEAARIGAGFGYDEINLNVGCPSDRVQSGTFGACLMRTPELVADCVSAMKRATDLPVTVKCRIGVDDQDPEAALDAVADLVFAAGADALWVHARKAWLQGLSPKENREIPPLDYPRVYRLKAKHAGRFVGINGGIQTLAEARAHLDSVDGVMLGRAAYHNPRMLAGIDRPDGEGDVDLAAIVDAMKDYAARHIERGGRLAHVSRHMTGLMHGLPGARRFRQILSTDAARPGAGPEVLDHAFAEAMQAAADQAA*