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SCNpilot_expt_1000_bf_scaffold_6783_curated

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6783_curated_1
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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292..1713
DNA (1422bp) protein (474aa)
Mg2+ transporter MgtE n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KPC6_MESAW
Mg2+ transporter MgtE
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_6783_curated_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1937..2590)
DNA (654bp) protein (218aa)
OmpA/MotB domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HW97_9RHIZ
OmpA/MotB domain-containing protein {ECO:0000313|EMBL:EHK54940.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
OmpA/MotB domain-containing protein
SCNpilot_expt_1000_bf_scaffold_6783_curated_3
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2688..3752)
DNA (1065bp) protein (355aa)
diguanylate cyclase n=1 Tax=Hoeflea sp. 108 RepID=UPI000372F326
diguanylate cyclase; K13590 diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AEH88554.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_6783_curated_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3969..4802)
DNA (834bp) protein (278aa)
2,5-didehydrogluconate reductase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRI2_9RHIZ
2,5-didehydrogluconate reductase {ECO:0000313|EMBL:EHK56646.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
2,5-diketo-D-gluconate reductase
SCNpilot_expt_1000_bf_scaffold_6783_curated_5
unknown

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comp(4967..5281)
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6783_curated_6
unknown

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5708..5812
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6783_curated_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5809..6285
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRI4_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56648.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
isoprenylcysteine carboxyl methyltransferase
SCNpilot_expt_1000_bf_scaffold_6783_curated_8
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6373..6759)
DNA (387bp) protein (129aa)
MerR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRI6_9RHIZ
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CDX44195.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
putative transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_6783_curated_9
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7386..7727)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZFK7_9FIRM
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
SCNpilot_expt_1000_bf_scaffold_6783_curated_10
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8281..11076
DNA (2796bp) protein (932aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7]
Alanine--tRNA ligase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F7T6_9RHIZ
SCNpilot_expt_1000_bf_scaffold_6783_curated_11
Rhodobacteraceae bacterium KLH11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11153..11485
DNA (333bp) protein (111aa)
Fumarylacetoacetate hydrolase family protein n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NS20_9RHOB
Fumarylacetoacetate hydrolase family protein {ECO:0000313|EMBL:EEE39031.1}; TaxID=467661 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium KLH11.;"
fumarylacetoacetate hydrolase
SCNpilot_expt_1000_bf_scaffold_6783_curated_12
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11482..11847
DNA (366bp) protein (122aa)
Fumarylacetoacetate hydrolase family protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VFX0_9RHOB
Fumarylacetoacetase {ECO:0000313|EMBL:KGJ09281.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
fumarylacetoacetate (FAA) hydrolase
SCNpilot_expt_1000_bf_scaffold_6783_curated_13
Mesorhizobium sp. LNJC394B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11933..12967
DNA (1035bp) protein (345aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
tRNA-dihydrouridine synthase A; K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-] rbh
tRNA-dihydrouridine synthase A n=2 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G074_9RHIZ
SCNpilot_expt_1000_bf_scaffold_6783_curated_14
Mesorhizobium sp. LSJC269B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13067..13768)
DNA (702bp) protein (234aa)
UPI0003CE496F related cluster n=1 Tax=unknown RepID=UPI0003CE496F
Aspartic protease {ECO:0000313|EMBL:ESW88454.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC269B00.;"
hypothetical protein; K06985 aspartyl protease family protein
SCNpilot_expt_1000_bf_scaffold_6783_curated_15
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13773..14000)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000301F15B
Uncharacterized protein {ECO:0000313|EMBL:CDX35990.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein; K06938
SCNpilot_expt_1000_bf_scaffold_6783_curated_16
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14151..15233
DNA (1083bp) protein (361aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000313|EMBL:CCV13712.1}; EC=2.4.2.21 {ECO:0000313|EMBL:CCV13712.1};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21); K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F8W8_9RHIZ
SCNpilot_expt_1000_bf_scaffold_6783_curated_17
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15084..16610)
DNA (1527bp) protein (509aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
ATPase domain-containing protein; K07716 two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
UPI0003CFAA90 related cluster n=1 Tax=unknown RepID=UPI0003CFAA90
SCNpilot_expt_1000_bf_scaffold_6783_curated_18
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16780..17331
DNA (552bp) protein (184aa)
UPI0003CEBE61 related cluster n=1 Tax=unknown RepID=UPI0003CEBE61
Nuclease {ECO:0000313|EMBL:ESY72899.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
nuclease
SCNpilot_expt_1000_bf_scaffold_6783_curated_19
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17344..17955
DNA (612bp) protein (204aa)
Glutathione S-transferase domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HV65_9RHIZ
Glutathione S-transferase {ECO:0000313|EMBL:EXL01734.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
glutathione S-transferase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_6783_curated_20
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17959..18588
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YBQ0_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH88874.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_6783_curated_21
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18688..19185
DNA (498bp) protein (166aa)
AsnC family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HV67_9RHIZ
AsnC family transcriptional regulator {ECO:0000313|EMBL:EHK55370.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcriptional regulator AsnC-type-like protein; K05800 Lrp/AsnC family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_6783_curated_22
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19192..19449)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRR5_9RHIZ
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56578.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_expt_1000_bf_scaffold_6783_curated_23
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19768..20484)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F4Y9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV06941.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_6783_curated_24
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20488..20955)
DNA (468bp) protein (156aa)
oxidoreductase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035F017E
6-phosphogluconate dehydrogenase NAD-binding protein
6-phosphogluconate dehydrogenase NAD-binding protein {ECO:0000313|EMBL:AEH88879.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
Displaying 24 items

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