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SCNpilot_expt_1000_bf_scaffold_3047_curated_10

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: 11501..12943

Top 3 Functional Annotations

Value Algorithm Source
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 499.0
  • Bit_score: 750
  • Evalue 1.50e-213
hisS; histidyl-tRNA synthetase; K01892 histidyl-tRNA synthetase [EC:6.1.1.21] similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 491.0
  • Bit_score: 742
  • Evalue 6.80e-212
histidyl-tRNA synthase n=1 Tax=Hoeflea sp. 108 RepID=UPI000368B8B5 similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 505.0
  • Bit_score: 751
  • Evalue 4.70e-214

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1443
ATGGCGGACAAGGCTGAGAGAACGAAGGCGCGGCTGCCGCGGGGCTTCGTCGACCGCCACGCCGCCGACATCCGCGCGGTCGACGCGATGACGGCGAAGATCAGGGAAGTCTACGAGCTCTACGGCTTCGAGCCGGTCGAGCAGCCGCTGATCGAATACACCGACGCGCTCGGAAAGTTCCTGCCCGACCAGGACCGGCCCAACGAGGGCGTGTTCTCCTTTCAGGACGACGACGAGCAGTGGCTGTCGCTGCGCTACGACCTGACCGCGCCCCTCGCCCGCTTCGTCGCCGAGAACTTCGAGGCGCTGCCGAAGCCCTATCGCAGCTATCGCTCGGGCTGGGTGTTCCGCAACGAGAAGCCCGGCCCCGGCCGCTTCCGCCAGTTCATGCAGTTCGACGCCGACATCGTCGGCACGCCGGGCGTGGCGGCGGACGCCGAGATGGCGATGATGATGGCCGACACGCTGGAGGCCGTGGGGATCAAGCGCGGCGACTACGTGATCCGGGTGAACAACCGCAAGGTGCTGGATGGGGTGCTGGAGGCGATCGGCCTCGGCGGCGCCGAAAACGCCGGCCGGCGGCTGACCGTCCTGCGGGCGATCGACAAGCTCGACAAGTTCGGGCCGGAGGGCGTGCGCCTGCTGCTGGGCAGGGGTCGGCTCGACGAGAGCGGCGACTTCACGAAAGGCGCGGGGCTGGACGACGCCGGCATCGCGAAGGTGCTCGCCTATATCGAGACCGGCGAGATCGAGGACAACGAGGGCGTCGCGGAGTTAGGCCAGATCCGCGCGCTTTGCGCCGCAGCCGGCTATGACGACGGCCGCATCAAGATCGACCCCTCCGTCGTCCGTGGCCTCGAATACTACACCGGCCCGGTCTACGAGGCCGAGCTGACCTTTCCGGTCGTCAACGAGGACGGCGAGACGGTGCGCTTCGGCTCCGTCGCCGGCGGCGGGCGCTATGACGGGCTTGTCTCGCGNNNNNNNNNNGCGACCGGCTTCTCGATCGGCGTGTCGCGGCTCACCGCCGCGCTGAAGAATCTCGGCAAGCTGGAGAACACCGACGTCATCGCGCCGGTCGTGGTGCTCGTCATGGACAAGGACACCGACAGCCTCGGCCGCTACCAGAAGATGGTGTCGGCGCTCCGCCAGGCCGGCATCCGCGCCGAGATGTATCTCGGCGGCTCCGGCATGAAGGCGCAGATGAAGTATGCCGACCGTCGCGGCGCGCCGTGCGTCGTCATCCAGGGCGGCGACGAGCGCGCGAAAGGCGAGGTGCAGGTCAAGGATCTGGTCGCCGGGGCCAAGGCGGCGGAAGAAATCACCGACAATGCCGAGTGGCGCGCCAGCCGCCCGGCGCAGTTTTCCGTGCCCGAGGGCGAGCTGGTCGAGGCGGTGCAGCGCGTCCTCGATGCACAAAAGGCGGATCGGGCGAAGGGATGA
PROTEIN sequence
Length: 481
MADKAERTKARLPRGFVDRHAADIRAVDAMTAKIREVYELYGFEPVEQPLIEYTDALGKFLPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPLARFVAENFEALPKPYRSYRSGWVFRNEKPGPGRFRQFMQFDADIVGTPGVAADAEMAMMMADTLEAVGIKRGDYVIRVNNRKVLDGVLEAIGLGGAENAGRRLTVLRAIDKLDKFGPEGVRLLLGRGRLDESGDFTKGAGLDDAGIAKVLAYIETGEIEDNEGVAELGQIRALCAAAGYDDGRIKIDPSVVRGLEYYTGPVYEAELTFPVVNEDGETVRFGSVAGGGRYDGLVSXXXXATGFSIGVSRLTAALKNLGKLENTDVIAPVVVLVMDKDTDSLGRYQKMVSALRQAGIRAEMYLGGSGMKAQMKYADRRGAPCVVIQGGDERAKGEVQVKDLVAGAKAAEEITDNAEWRASRPAQFSVPEGELVEAVQRVLDAQKADRAKG*