name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_3047_curated_1
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria
|
Not on your lists |
comp(2..412)
|
Isoleucine--tRNA ligase {ECO:0000313|EMBL:KIF43843.1}; EC=6.1.1.5 {ECO:0000313|EMBL:KIF43843.1};; Flags: Fragment;; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
UPI0003CF9E2C related cluster n=1 Tax=unknown RepID=UPI0003CF9E2C
isoleucyl-tRNA synthetase
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_2
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1208..1420
|
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8B7V6_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:AJC78874.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_3
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1411..1806
|
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
Ribonuclease VapC n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2K9P3_RHIEC
hypothetical protein; K07062
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1803..2789)
|
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ribF; bifunctional riboflavin kinase/FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2); K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
rbh
Bifunctional riboflavin kinase/FMN adenylyltransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUV3_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_5
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2792..3652)
|
HAD family hydrolase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035CFD4B
HAD family hydrolase {ECO:0000313|EMBL:EHK55480.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
HAD-superfamily class IIA hydrolase, TIGR01459
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4212..5030
|
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUV1_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK55479.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
diguanylate phosphodiesterase; K13593 cyclic-di-GMP phosphodiesterase, flagellum assembly factor TipF
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_7
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5141..7129
|
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YC73_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH10638.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_8
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7308..9227
|
Flp pilus assembly protein TadG n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KQM1_MESAW
Flp pilus assembly protein TadG
Flp pilus assembly protein TadG {ECO:0000313|EMBL:AGB46985.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_9
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9354..11306
|
UPI0003D012C0 related cluster n=1 Tax=unknown RepID=UPI0003D012C0
Uncharacterized protein {ECO:0000313|EMBL:ESZ23026.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
Flp pilus assembly protein TadG
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_10
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11501..12943
|
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hisS; histidyl-tRNA synthetase; K01892 histidyl-tRNA synthetase [EC:6.1.1.21]
histidyl-tRNA synthase n=1 Tax=Hoeflea sp. 108 RepID=UPI000368B8B5
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_11
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13161..14279
|
UPI0003CEA508 related cluster n=1 Tax=unknown RepID=UPI0003CEA508
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
tRNA synthetase class II (G H P and S); K02502 ATP phosphoribosyltransferase regulatory subunit
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_12
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14276..14974
|
ATP phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00046302}; EC=2.4.2.17 {ECO:0000256|SAAS:SAAS00046302};; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
ATP phosphoribosyltransferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D3511E
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_13
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15049..15432)
|
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D0C8_9RHIZ
Membrane protein {ECO:0000313|EMBL:KJS20906.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
DoxX family protein; K15977 putative oxidoreductase
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_14
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15571..16227)
|
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
fumarate hydratase n=1 Tax=Rhizobium loti RepID=UPI000366A58C
fumarate hydratase, class II
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_15
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17114..18310
|
Extracellular ligand-binding receptor n=1 Tax=Citreicella sp. SE45 RepID=D0D225_9RHOB
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EEX14063.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. SE45.;"
branched chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_16
Betaproteobacteria bacterium MOLA814, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18376..19170
|
Lipopolysaccharide export system ATP-binding protein LptB {ECO:0000313|EMBL:ESS14675.1}; EC=3.6.3.- {ECO:0000313|EMBL:ESS14675.1};; TaxID=1408164 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="Betaproteobacteria bacterium MOLA814.;"
Lipopolysaccharide export system ATP-binding protein LptB n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V5AGE5_9PROT
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_17
Betaproteobacteria bacterium MOLA814, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19167..19871
|
ABC transporter-like protein (EC:3.6.3.27); K01996 branched-chain amino acid transport system ATP-binding protein
LIV-I protein F n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V4YNC2_9PROT
LIV-I protein F {ECO:0000313|EMBL:ESS14676.1}; TaxID=1408164 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="Betaproteobacteria bacterium MOLA814.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_18
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19874..20878
|
Branched-chain amino acid ABC transporter, permease protein, putative n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FT11_9RHOB
Branched-chain amino acid ABC transporter, permease protein, putative {ECO:0000313|EMBL:EDM70863.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. AzwK-3b.;"
branched-chain amino acid transport system, permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_19
Rhodobacterales bacterium HTCC2255, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20878..22227
|
inner-membrane translocator (EC:3.6.3.-); K01998 branched-chain amino acid transport system permease protein
ABC branched-chain amino acid transporter family, inner membrane subunit n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FGI9_9RHOB
ABC branched-chain amino acid transporter family, inner membrane subunit {ECO:0000313|EMBL:EAU52650.1}; TaxID=367336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" source="Rhodobacterales bacterium HTCC2255.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_20
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22229..22660)
|
Membrane protein-like protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WUR3_RHOS5
hypothetical protein
Membrane protein-like protein {ECO:0000313|EMBL:ABP71127.1}; Flags: Precursor;; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_21
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22903..25029)
|
molecular chaperone GroEL n=1 Tax=Hoeflea sp. 108 RepID=UPI0003678B97
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
groEL; molecular chaperone GroEL; K04077 chaperonin GroEL
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_22
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25107..25403)
|
molecular chaperone GroES n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030C2D8C
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
chaperonin Cpn10; K04078 chaperonin GroES
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_23
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25564..26202)
|
DNA-3-methyladenine glycosylase I; K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
3-methyladenine DNA glycosylase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F615FD
3-methyladenine DNA glycosylase {ECO:0000313|EMBL:EXL03710.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_24
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26403..27263
|
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DCA8A5
ErfK/YbiS/YcfS/YnhG
ErfK/YbiS/YcfS/YnhG protein {ECO:0000313|EMBL:EKF20648.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_25
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27442..28320
|
Sodium dependent transporter n=1 Tax=Ahrensia sp. R2A130 RepID=E0MQE5_9RHOB
Bile acid:sodium symporter {ECO:0000313|EMBL:KAJ02694.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter mediterraneus.;"
P3 protein (Solute carrier family 10 member 3); K03453 bile acid:Na+ symporter, BASS family
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_26
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28300..29616)
|
UPI0003CE40BE related cluster n=1 Tax=unknown RepID=UPI0003CE40BE
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein; K11473 glycolate oxidase iron-sulfur subunit
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_27
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29616..29957)
|
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CKM4_METED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAX26794.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_28
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29954..30181)
|
Uncharacterized protein id=4954838 bin=GWC2_Methylomirabilis_70_24 species=Nostoc sp. genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_29
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30209..30589)
|
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BUC6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM73178.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3047_curated_30
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30627..31838)
|
Glycolate oxidase FAD binding subunit n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F6G1_9RHIZ
Glycolate oxidase FAD binding subunit {ECO:0000313|EMBL:CCV11856.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
FAD linked oxidase domain-containing protein; K11472 glycolate oxidase FAD binding subunit
|