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SCNpilot_expt_1000_bf_scaffold_1110_curated_4

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: 2182..2970

Top 3 Functional Annotations

Value Algorithm Source
kduD-2; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase 2 (EC:1.1.1.127) similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 234.0
  • Bit_score: 240
  • Evalue 7.90e-61
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase 2 n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S9A2_RHIET similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 234.0
  • Bit_score: 240
  • Evalue 2.50e-60
Short-chain dehydrogenase {ECO:0000313|EMBL:KJB95752.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 244.0
  • Bit_score: 242
  • Evalue 7.10e-61

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Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGATCGGCGCATCCATTGCAAAACCGGCGTTGCAGCCGGCCGAGACCGGCCGGCGCATGGCGCCGCTCTTCGCGGGCGGCCTGCATGCGCTCGTCGTCGGCGGGACGACCGGCATCGGCCATGCGGTGTCCACCGCGCTCGGGGCGGCCGGCGTGGTGGTGACGGCAACCGGCATCAGTGAGGCCGAGATCTACTCGGCGCCTTTCGAGGCAGGCCTGGACCCCCGGCGCATGATCCTCGACGTCGCCGATCAGGACTCGGTCGACAAGGTGGTCTCCGGCCTGGAGCGGCTGGACATCATGGTGAACTGCGCCGGCATGAGCATGCCGCGCCGCGCGGAGTTCGATCCGTCCAACTTCCAGAAGGTGATCGACGTCAACCTGACCGGCGCGCTGCGGGTCGCGAATGCCGCGCGGCCGAAGATGGCGGGGAAAGGCGGCGCGATCGTCAATTTCTGTTCCTTCTACAGCCAGTTCGGCTCGGCCTATCTGCCGGCCTACGCGGCGAGCAAGGGCGGCCTGCTGCTGCTCACCAAGAGCCTTGCCAGCGCCTGGGTGAAGGAAGGCATCCGCGTCAATGCCGTGGCGCCGGGCGTGATCGCCACGCCGATGACCACGCCCTTGATGAAGAACGAGGCGGCGACGCGCGAGCTGACCTCGCGCGTGCCGATCGACCGCGTCGGCCAGCCGGCCGACGTCGCCGGCCCGGTGCTGTTCCTGTGCTCGCCGGCGGCGGCTTACGTGACGGGCGTGCTGCTGCCGGTCGATGGCGGCATGGTCGCGGCATGA
PROTEIN sequence
Length: 263
MIGASIAKPALQPAETGRRMAPLFAGGLHALVVGGTTGIGHAVSTALGAAGVVVTATGISEAEIYSAPFEAGLDPRRMILDVADQDSVDKVVSGLERLDIMVNCAGMSMPRRAEFDPSNFQKVIDVNLTGALRVANAARPKMAGKGGAIVNFCSFYSQFGSAYLPAYAASKGGLLLLTKSLASAWVKEGIRVNAVAPGVIATPMTTPLMKNEAATRELTSRVPIDRVGQPADVAGPVLFLCSPAAAYVTGVLLPVDGGMVAA*