ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1110_curated_17

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: comp(14464..14907)

Top 3 Functional Annotations

Value Algorithm Source
Tripartite tricarboxylate transporter TctB family n=1 Tax=Rhizobium sp. CF080 RepID=J3B0J8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 40.7
  • Coverage: 145.0
  • Bit_score: 121
  • Evalue 5.60e-25
Uncharacterized protein {ECO:0000313|EMBL:KGE02085.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.1
  • Coverage: 145.0
  • Bit_score: 122
  • Evalue 6.00e-25
putative transporter similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 147.0
  • Bit_score: 113
  • Evalue 8.20e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
GTGCGGATCCGCAGCCTCCAGGACTTCCTCGCGGGCCTGATCTTCCTCGCCTTCGGCATCGTGGGGCTGTGGATCGGCCGCGGCTACCAGATGGGCAGCGCCTCGCACATGGGGCCGGGCTATTTCCCGGTCCTGCTGTCGGGCGGACTGCTCCTGCTCGGGGCGGCGGTCGCGGCGCGCTCCTTCGTCGTCGAAGGCCAGCCGATCGAGACGATCGGCTGGCGACCCGTCCTGTGCATCGCCGGCGCGGTGTTCGCCTTCGGCGCCACCATCGAACGCTTCGGGCTGGTCGTTGCGGTCTGCGCGGTGACGCTGCTGATGGCGGTCGCAACCGAGGAGCGCCGCTGGCCCGAGGTGATCGCCTCGGCGGTGGTGATGTCGCTGTTCTGCATCGGCATCTTCGTCTTCGGACTGGGCGAGCCGCTGAAGATCTGGGTCTTCTGA
PROTEIN sequence
Length: 148
VRIRSLQDFLAGLIFLAFGIVGLWIGRGYQMGSASHMGPGYFPVLLSGGLLLLGAAVAARSFVVEGQPIETIGWRPVLCIAGAVFAFGATIERFGLVVAVCAVTLLMAVATEERRWPEVIASAVVMSLFCIGIFVFGLGEPLKIWVF*