ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1557_curated_10

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: comp(7384..8385)

Top 3 Functional Annotations

Value Algorithm Source
Retron-type reverse transcriptase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CSK1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 326.0
  • Bit_score: 457
  • Evalue 9.70e-126
Retron-type reverse transcriptase {ECO:0000313|EMBL:EJN11814.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 326.0
  • Bit_score: 457
  • Evalue 1.40e-125
RNA-directed DNA polymerase similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 336.0
  • Bit_score: 252
  • Evalue 1.90e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. YR681 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
ATGGCCAAGAAGTACCGCAACCTGATCGGCCGTATCGTGGCCGACGACAACATGCTGGCCGCCTACCGGCGCACGGCTGCCGGCCGGCGTCTCTCGACCGGCTACCTTGAGTTCAAGGAATTCTCGCCGCTCAACCTCGATCGGCTGGCGGCCGACATGGCGAGCGGCGCCTATCGGCCGGGCGCGCAGCGCGAGTTCATGATCTACGACCCGAAGCTCCGGCTGATCTCGGCGCTTCCCTTCCGCGACAGGGTCGCGCAACATGCGGTCTGCCGCGTCATCGAGCCGATCTTCGATGCGACGCTGTTGCCACGCAGCTTTGCATGCCGGAAGGGCAAGGGCACGCATGCCGGCGTCGTCGCGCTGCAGGCCGAATTGCGGCGCCTGACGCGCGACGGCGCGTCGCTCTATGCGCTGAAGACGGACTTCTCCCGCTACTTCGCCTCGATCGAGCGGCCGGTGCTCTGGCGCATGATCGAGGCCAAGATTTCCTGCCGCGCGACGCTGCGCGTCATCGAGGCGATGGTTCCGCGCGAGGGCATCGGCCTGCCGATCGGCAACCTCACCTCGCAGATCCTCGCCAACGTCTATTCCGGCGCCGTCGATCGTCACCTGCAGCAGGGCCTCGGCGAGCGCTGCTGGTATCGCTACATGGACGATCTCGTCGTGCTCGGCCGGTCGGTCGCGCATCTGCGCGCCGTCCGCGACGAGATCGAGCGGCTGGCCCGCGAAGAGCTCGGCCTCCGCTTCTCGAAATGGTCGGTCCAACCGATCAGCCGCGGCGTCAATTTCCTCGGCTACCGCATCTGGCCCCGCCACAAGCTGCTGCGCCGTGACAGCGTCGCCCGCGCCAGGCGCAAGATCGCCCGCTACCGCGCCGCCGGCGACACGGCCCGCCTGGAGCAATTCCTGTCTGCGTGGACAGGCCATGCGTCGTGGGCCGACACGCGCAACCTGCTGGCGAGCCTCGGCGTCGGAGGTCGCGATGGCGCTGCATCCTGA
PROTEIN sequence
Length: 334
MAKKYRNLIGRIVADDNMLAAYRRTAAGRRLSTGYLEFKEFSPLNLDRLAADMASGAYRPGAQREFMIYDPKLRLISALPFRDRVAQHAVCRVIEPIFDATLLPRSFACRKGKGTHAGVVALQAELRRLTRDGASLYALKTDFSRYFASIERPVLWRMIEAKISCRATLRVIEAMVPREGIGLPIGNLTSQILANVYSGAVDRHLQQGLGERCWYRYMDDLVVLGRSVAHLRAVRDEIERLAREELGLRFSKWSVQPISRGVNFLGYRIWPRHKLLRRDSVARARRKIARYRAAGDTARLEQFLSAWTGHASWADTRNLLASLGVGGRDGAAS*