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SCNpilot_expt_1000_bf_scaffold_1557_curated

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1557_curated_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..341)
DNA (339bp) protein (113aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18]
methionine aminopeptidase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036B2B51
SCNpilot_expt_1000_bf_scaffold_1557_curated_2
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

500..1891
DNA (1392bp) protein (464aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JRQ5_HYPDA
Uncharacterized protein {ECO:0000313|EMBL:CDN58459.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1557_curated_3
unknown

Not on your lists

1986..3449
DNA (1464bp) protein (488aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1557_curated_4
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3468..4685)
DNA (1218bp) protein (406aa)
Serine--glyoxylate transaminase (EC:2.6.1.45); K00830 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
Serine--glyoxylate transaminase n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WU45_RHOS5
Septum site-determining protein {ECO:0000313|EMBL:KKC33570.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
SCNpilot_expt_1000_bf_scaffold_1557_curated_5
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4836..5231)
DNA (396bp) protein (132aa)
membrane protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000370E906
Membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG) {ECO:0000313|EMBL:CDX11570.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
eicosanoid and glutathione metabolism membrane-associated protein
SCNpilot_expt_1000_bf_scaffold_1557_curated_6
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5358..5549)
DNA (192bp) protein (64aa)
UPI0003CEEE58 related cluster n=1 Tax=unknown RepID=UPI0003CEEE58
Uncharacterized protein {ECO:0000313|EMBL:ESW88758.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1557_curated_7
unknown

Not on your lists

comp(5620..5844)
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1557_curated_8
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6024..7136)
DNA (1113bp) protein (371aa)
Site-specific recombinase XerD n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HSK6_9RHIZ
Site-specific recombinase XerD {ECO:0000313|EMBL:EJN04293.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
integrase family protein
SCNpilot_expt_1000_bf_scaffold_1557_curated_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7146..7400)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMA1_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71841.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_1557_curated_10
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7384..8385)
DNA (1002bp) protein (334aa)
Retron-type reverse transcriptase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CSK1_9BRAD
Retron-type reverse transcriptase {ECO:0000313|EMBL:EJN11814.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
RNA-directed DNA polymerase
SCNpilot_expt_1000_bf_scaffold_1557_curated_11
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8811..9176)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I158_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJN11813.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1557_curated_12
unknown

Not on your lists

comp(9221..9358)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1557_curated_13
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9370..9735)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I158_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJN11813.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1557_curated_14
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9780..10685)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2VZS6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJN11812.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1557_curated_15
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10741..11607)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2VZS6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJN11812.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1557_curated_16
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11635..11916)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LH66_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF17099.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
SCNpilot_expt_1000_bf_scaffold_1557_curated_17
unknown

Not on your lists

comp(11913..12149)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1557_curated_18
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12142..12444)
DNA (303bp) protein (101aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQW9_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56831.1}; Flags: Fragment;; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_expt_1000_bf_scaffold_1557_curated_19
unknown

Not on your lists

comp(12441..12587)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1557_curated_20
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12771..13019)
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQZ5_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56857.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1557_curated_21
unknown

Not on your lists

comp(13021..13308)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1557_curated_22
unknown

Not on your lists

13465..13746
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1557_curated_23
unknown

Not on your lists

15182..15721
DNA (540bp) protein (180aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1557_curated_24
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15840..16322
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7XZV1_MESOW
Uncharacterized protein {ECO:0000313|EMBL:KDP73651.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1557_curated_25
unknown

Not on your lists

16322..16849
DNA (528bp) protein (176aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1557_curated_26
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16857..18089
DNA (1233bp) protein (411aa)
MT-A70 family protein n=1 Tax=Sinorhizobium meliloti (strain AK83) RepID=F6E362_SINMK
MT-A70 family protein
MT-A70 family protein {ECO:0000313|EMBL:AEH79160.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
SCNpilot_expt_1000_bf_scaffold_1557_curated_27
unknown

Not on your lists

18086..18301
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1557_curated_28
unknown

Not on your lists

18298..18669
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1557_curated_29
unknown

Not on your lists

18666..18797
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1557_curated_30
unknown

Not on your lists

18798..19073
DNA (276bp) protein (92aa)

This feature has no annotations

Displaying items 1-30 of 54 in total

View Taxonomy