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SCNpilot_expt_1000_bf_scaffold_1433_curated_24

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: comp(30009..30743)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q6UP75_CUPPJ similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 228.0
  • Bit_score: 233
  • Evalue 2.80e-58
ABC transporter related; K01995 branched-chain amino acid transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 228.0
  • Bit_score: 233
  • Evalue 9.00e-59
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.1
  • Coverage: 235.0
  • Bit_score: 245
  • Evalue 6.00e-62

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Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGCTGCGCCTCGGATCCGTATCGAAGACGTTCTCCGGCTTCGCCGCCCTGACGGATGTCGACCTCGCGGTCGAGCCCGGCGAGATCCGCGCGATCATCGGGGCCAACGGCGCCGGCAAGAGCACGCTGCTCAACGTCGTCTCGGGCCTGCTGCGCCCGTCCGCCGGCACGGTGAGCTATGACGGGCACGACGTGACCGCGCGCGACCCGTCCGAGCTGGTCCTGCTCGGCCTGTCGCGCTCGTTCCAGATCACCAGCGTCTTCAACGACTTCACCGCCTTCCAGAACGTGCGGATCGCCCTGCTCGCCTACCATCGGCGCACGCGGCAGCTCTTCGGCTCGGTCGAACGGCTGCTGCGCGCCGAGACGCTGGAATTGCTGGAGGCGGTCGGCATCGCCGACAGGGCGGGGCGGCAGGCGGGCGAGCTCGCCGCCGGCGATCGCAAGCGGCTGGAATTCGCGATGACGCTGGCGGCCAGACCCAAGATGCTGCTGCTGGACGAGCCGACCGCCGGCATGGCGCCGAACGAGCGCGAGATCGTCGTCGCCCTTCTCGCCTCGCTCAACCGTGACAAGCGCGTCACGATCCTGTTCACCGAGCACGACCTCGACATGGTCAACAGCCTGGCGCACAGGATCAGCGTCCTCCACCAGGGTCGCGTGCTGGCGGAGGGGCATCCGGACGAGATCAGGCGCAACGAGCAGGTTCGCGCCGCCTATGTCGGGGCCGCATGA
PROTEIN sequence
Length: 245
MLRLGSVSKTFSGFAALTDVDLAVEPGEIRAIIGANGAGKSTLLNVVSGLLRPSAGTVSYDGHDVTARDPSELVLLGLSRSFQITSVFNDFTAFQNVRIALLAYHRRTRQLFGSVERLLRAETLELLEAVGIADRAGRQAGELAAGDRKRLEFAMTLAARPKMLLLDEPTAGMAPNEREIVVALLASLNRDKRVTILFTEHDLDMVNSLAHRISVLHQGRVLAEGHPDEIRRNEQVRAAYVGAA*