name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1433_curated_1 |
Not on your lists |
comp(2..892)
|
Thiolase n=1 Tax=Mycobacterium thermoresistibile ATCC 19527 RepID=G7CB25_MYCTH
Uncharacterized protein {ECO:0000313|EMBL:KKL83892.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
thiolase
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(950..2653)
|
cyclohexanecarboxylate-CoA ligase (EC:6.2.1.26); K04116 cyclohexanecarboxylate-CoA ligase [EC:6.2.1.-]
AMP-dependent synthetase and ligase id=4748863 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_3
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2689..3666)
|
Possible isomerase/decarboxylase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TXF3_9RHOB
Possible isomerase/decarboxylase {ECO:0000313|EMBL:EAQ03513.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_4
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3668..4441)
|
Cyclase, putative n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TXF2_9RHOB
Cyclase {ECO:0000313|EMBL:KGM50178.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;"
cyclase
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_5
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4461..5759)
|
TrapT family, dctM subunit, C4-dicarboxylate transport n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TXF1_9RHOB
TrapT family, dctM subunit, C4-dicarboxylate transport {ECO:0000313|EMBL:EAQ03511.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597).;"
siaT; TRAP transporter, DctM-like membrane protein
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_6
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5756..6313)
|
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TXF0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ03510.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597).;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_7
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6341..7402)
|
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TXE9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ03509.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597).;"
TRAP-type C4-dicarboxylate transport system periplasmic component-like
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7535..7951)
|
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C160_SPHTD
hypothetical protein; K07068
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_9
unknown
|
Not on your lists |
8143..9195
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_10
unknown
|
Not on your lists |
11348..11650
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_11
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12219..13013)
|
High-affinity branched chain amino acid ABC transporter, ATP-binding protein n=1 Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z7Y3_DEHE1
high-affinity branched chain amino acid ABC transporter, ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_12
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13066..14121)
|
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=3 Tax=Dehalococcoides mccartyi RepID=A5FQW3_DEHSB
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
Tax=CG_Desulfob_01
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_13
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria
|
Not on your lists |
comp(14123..15010)
|
Putative uncharacterized protein n=1 Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WK32_9BACI
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
Tax=RBG_13_Chloroflexi_54_8_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_14
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria
|
Not on your lists |
comp(15013..17004)
|
Putative fatty-acid--CoA ligase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2I3_CALAS
putative fatty-acid--CoA ligase
Tax=RBG_16_Chloroflexi_57_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_15
Anoxybacillus thermarum, Anoxybacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
comp(17001..17792)
|
Anoxybacillus thermarum strain AF/04 contig000015, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ94796.1}; EC=3.6.3.25 {ECO:0000313|EMBL:KIQ94796.1};; TaxID=404937 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" source="Anoxybacillus thermarum.;"
ABC transporter-like protein n=1 Tax=Anoxybacillus sp. DT3-1 RepID=M5QT88_9BACI
amino acid ABC transporter protein, ATPase
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_16
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria
|
Not on your lists |
comp(17861..19417)
|
methylmalonyl-CoA carboxytransferase (EC:2.1.3.1)
Propionyl-CoA carboxylase, putative id=4849609 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Pusillimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RBG_13_Chloroflexi_54_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_17
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19563..20363)
|
Enoyl-CoA hydratase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS86_PUSST
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:KCB44919.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
enoyl-CoA hydratase
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_18
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20948..24274)
|
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PML4_9BRAD
Carbamoyl-phosphate synthase large subunit {ECO:0000313|EMBL:KIF81143.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
carbamoyl-phosphate synthase L chain ATP-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_19
Variovorax sp. DB1, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24624..25274)
|
Putative transcription regulator n=1 Tax=Variovorax sp. DB1 RepID=I3RYF3_9BURK
Putative transcription regulator {ECO:0000313|EMBL:AFK33040.1}; TaxID=1179817 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. DB1.;"
regulatory protein, TetR
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_20
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(25471..26259)
|
Oxidoreductase n=1 Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2TH14_9NOCA
Carbonyl reductase family member 4 {ECO:0000313|EMBL:AHK34146.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
oxidoreductase
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_21
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27116..27655)
|
Transcriptional regulator n=1 Tax=Azoarcus sp. KH32C RepID=H0Q209_9RHOO
badR; transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAL25708.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(27674..29272)
|
long-chain-fatty-acid--CoA ligase; K02182 crotonobetaine/carnitine-CoA ligase [EC:6.2.1.-]
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:AEA27414.1}; EC=6.2.1.3 {ECO:0000313|EMBL:AEA27414.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
acyl-CoA synthetase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE385
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_23
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29323..30012)
|
Putative urea ABC transporter, ATP-binding protein UrtE n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A5U1_9PROT
Putative urea ABC transporter, ATP-binding protein UrtE {ECO:0000313|EMBL:EHL97400.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_24
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(30009..30743)
|
ABC transporter related n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q6UP75_CUPPJ
ABC transporter related; K01995 branched-chain amino acid transport system ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_25
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30746..31567)
|
Inner-membrane translocator n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q6UP76_CUPPJ
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:AAZ65787.1}; Putative ABC transporter permease protein {ECO:0000313|EMBL:AAR31061.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_26
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31831..32124
|
Uncharacterised protein {ECO:0000313|EMBL:CRE22795.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_27
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32574..33797)
|
Putative ABC transporter substrate-binding protein n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q6UP78_CUPPJ
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:AAR31059.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_28
unknown
|
Not on your lists |
comp(34120..34398)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_29
unknown
|
Not on your lists |
comp(34399..34551)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1433_curated_30
unknown
|
Not on your lists |
comp(34585..34701)
|
This feature has no annotations |