ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2104_curated_14

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: comp(12508..13215)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J3CQY4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 226.0
  • Bit_score: 242
  • Evalue 4.50e-61
Transcriptional regulator {ECO:0000313|EMBL:EJL76446.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 226.0
  • Bit_score: 242
  • Evalue 6.30e-61
transcriptional regulator GntR family similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 233.0
  • Bit_score: 241
  • Evalue 3.20e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGCGCTCCATGACCGCACCGCATCGCACGCCGCTCGAACGCGACCGCCAGGCCGCCCCCCAGATCGCCGACATCCTGCGTCGGCGCATCCTCACCCTTGAGCTGAGGCCCAGTTCGGTGCTGTCGCGCCTCGCCCTGCAGGACGAGTTCGGCGTCAGCCAGACGCCGGTGCGCGACGCCCTCCAGCAACTGGAGCGCGAGGGGCTGGTGGAGATCTACCCGCAGAGCTCGACGCTCGTCTCGCGCATCGACGTCGCCGCCGCCAGGCAGGCCCACTTCCTGCGCCGCTCGATCGAGATCGAGGCCGCGCGGGTGGTCGCATCGTCGCCGAATGCCTATATTATACAGCAGCTTGCGGCGGCGATCGAAGAGCAGCGCCGCTACCGTGACCCGGCCGAATACCCCAATTTCATCCAGGCGGACCGCATGTTCCACCGCGTCTTCTACGAAGCCGCGAATGTGGCGTCGCTGTGGGATCTGGTGCGGCGCGAGAGCGGGCACATAGACCGGCTGCGCCTGCTGAACCTGCCGATAGAGGGCAAGGTCGAGGCGATCTTCAACGACCACGAATCGCTGGTCGCGGCCGTCGAGCGCGGCGATCCCGAGGGCGCGGCGGCTGTGGTGCGGCGCCATCTGTCCGGCACGCTGGCGGCGATCGACGAGATCGCGGCCGCGAATCCGGACTACTTCAAGGGTGAGTCCTCATAA
PROTEIN sequence
Length: 236
MRSMTAPHRTPLERDRQAAPQIADILRRRILTLELRPSSVLSRLALQDEFGVSQTPVRDALQQLEREGLVEIYPQSSTLVSRIDVAAARQAHFLRRSIEIEAARVVASSPNAYIIQQLAAAIEEQRRYRDPAEYPNFIQADRMFHRVFYEAANVASLWDLVRRESGHIDRLRLLNLPIEGKVEAIFNDHESLVAAVERGDPEGAAAVVRRHLSGTLAAIDEIAAANPDYFKGESS*