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SCNpilot_expt_1000_bf_scaffold_5001_curated_21

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: comp(15831..16685)

Top 3 Functional Annotations

Value Algorithm Source
opuAB; glycine/betaine/proline ABC transporter membrane protein (EC:3.6.3.32); K02001 glycine betaine/proline transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 277.0
  • Bit_score: 424
  • Evalue 2.40e-116
Glycine/betaine/proline transporter, membrane component of ABC transporter {ECO:0000313|EMBL:CCB65092.1}; EC=3.6.3.32 {ECO:0000313|EMBL:CCB65092.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 277.0
  • Bit_score: 424
  • Evalue 1.10e-115
Glycine/betaine/proline transporter, membrane component of ABC transporter n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JBM1_HYPSM similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 277.0
  • Bit_score: 424
  • Evalue 7.80e-116

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Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGGACCCCATCTCCGATTTCCTCGCGTCGTGGAAGGTGCCCATCGGCCGCTGGGGCAAGACGTTCATCGACTTCATCGTCGACCATTTCGAATGGCTGTTCGACGCCATCAAGCTGACGCTGAACGTCGTCGTCGGCGAGGTCACGGCGGCGCTGCTGATGGTGCCGCCCGTCCTGCTGGCGCTGCTCGTCGCGGCACTGGCGTGGTGGATGCAGCGCTCCTGGAAGCTCGCGCTCGGCGTCTTCATCGGGCTGGCGCTGATCATCAATCTCGGATTGTGGAAGGAGACGGTCCAGACGCTGGTCATCGTCGTCTTCGCGACTGCCATATCCATGTCCATCGGCGTCCCGATCGGCATCTGGGCGGCCCACAAGCCGCGCATCTGGGCCTTCACCCAGCCGACGCTGGATCTCATGCAGACGATGCCGACCTTCGTCTACCTTATCCCGATCCTGATCCTCTTCGGCCTCGGCGCCGCGCCGGCGCTGATCGTGACGATCATCTTCGCCATGCCGGCGCCGGTCCGCATGACCTATCTCGGCATCACCTCCATCCCGCGCGCGATGATCGAGGCGGGCGAGGCGTTCGGCGCCACGCCGCGGCAGCTTCTGTGGAAGGTGGAACTGCCCGCCGCCCTGCCGTCCATCATGGCCGGGCTTACGCAGTGCATCATGCTGTCGCTGTCGATGGTCGTGTTCGCGACGCTCATCGGCGCGCCGAGTCTCGGCAATCCGGTGTTCAAGGCGCTGTCCAACCGCAACATACCGCTCGGCATCGAGGCGGGCCTGGCGATCGTCATCCTCGCCATCGTGCTCGACCGGATGCTCGCGCAGCGCGTTGGAAAACGCCAGTGA
PROTEIN sequence
Length: 285
MDPISDFLASWKVPIGRWGKTFIDFIVDHFEWLFDAIKLTLNVVVGEVTAALLMVPPVLLALLVAALAWWMQRSWKLALGVFIGLALIINLGLWKETVQTLVIVVFATAISMSIGVPIGIWAAHKPRIWAFTQPTLDLMQTMPTFVYLIPILILFGLGAAPALIVTIIFAMPAPVRMTYLGITSIPRAMIEAGEAFGATPRQLLWKVELPAALPSIMAGLTQCIMLSLSMVVFATLIGAPSLGNPVFKALSNRNIPLGIEAGLAIVILAIVLDRMLAQRVGKRQ*