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SCNpilot_expt_1000_bf_scaffold_3335_curated_12

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: 11889..13328

Top 3 Functional Annotations

Value Algorithm Source
TolC family type I secretion outer membrane protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M8M5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 474.0
  • Bit_score: 556
  • Evalue 2.90e-155
Channel protein TolC {ECO:0000313|EMBL:KGF69501.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 457.0
  • Bit_score: 577
  • Evalue 2.20e-161
TolC family type I secretion outer membrane protein; K12543 outer membrane protein LapE similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 471.0
  • Bit_score: 527
  • Evalue 5.90e-147

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Taxonomy

Hoeflea sp. BAL378 → Hoeflea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1440
ATGGGGTTGAGGGGCGTTCTGGCAGTCGGCTGCGTGGCCGCTGCATTTTCACTCGGCGTCGGGTCGCCGGCTTCCGCAATGTCGTTGCGTGAGGCCGTGACCGAGGCGCTGACCACGAATCCGGAGATTCTGCAGGCCGCGGAGAATCGGGAAGCGGTCGAGTTCGAGTTGCGGCAGGCCCGCAGCCTCTATCTCCCCACTCTCGACCTCGAAGGCTCGGTCGGCATCCGCCGGCTCGACAGCCCGGGCCGTCGCACGCTCGGCACGGCCGGCAACGACCTCTACCCGAACGATGTCGGCCTGACGCTGCGCCAGACGCTGTTCGACGGCGGCGACCGCCGCTCGCAGGTCCAGCAGCAGGCCGCCCGCGTCGACGGCGCCTCCTTCCGCGTGCTGGAGCGTTCCGAGGCGATCGCGCTGTCGGTCGCGCAGGAATATCTCGAGATCATGCTGCAGGCGCAGATCGTCGAGGCCGCGCGCTCCAATGCCGGCTTCCACCAGCAGATCCTCGGCGACATCTCGCAGAGCGTCTCCGGCGGCACGCTGACTGAGGCCGACAGGATCCAGGGCCAGGAGCGGCTGCTCTCGGCCAACACCCGCCTCAAGGAGGCGAGCGAGGATCTCGAAGCGGCCAAGATCCGCTTCATGCGGCTGGTCGGCAAGCCGATCGGCAAGACCACCAATCCCGGCTCCGTCGCCAACGCGATCCCGCGCACGGTCGAGGCGGCCATTGAGCAGGCGCGCCGCAACAATCCGCGCATCGCGGCTGCCGGCGCCGATGCCGATGCCGCCGACGCGCTGGTGCGCGGCGCCAACGCGCCGTTCATGCCGAACATCTCGCTCGAGGGCACGGCGCGCGTCGGCGACGACGTCGACGGCTCCGACGGCTACACCTCGGACCTGCAGGCCCGCGTCGTCGCCCGCTGGAACCTCTACCGCGGCGGCCGCGACATCGCCGCCAAGCAGGAGCGCATCCGCCGTGCCGGCGAGCAGCGCCAGGCGCTGGCCGTCACCCACCGCGAGGTGGAGGAGACGATCCGCGATGCCTGGAACCAGCGCGCCAAGCGGGCCGAGCTCGCCTCCATGCTGCGCGATCAGGCCAGCACCAATGCCCGCCTCGTCTCGTCCTACCGCGAGCAGTTCCGCGTCGGCGAGCGTTCGCTCCTCGACGTGCTGGGCGCCCAGAACACCCGCTTCAACTCCGCCGTGCTGGCGCAGACCGCGGCCTATGCCTCGCTGTTCGCCGAATACCGGCTGCTGGCGGCGATGGGCGGTCTGGCCAAGACGCTGAAGACGCCGACCCTCGAGCAGGGCGACGCCTATGCGCGCAAGGAGTTCCGGGTTCCGGTCGCCGATGCGGCGCCCAGCTATGAGCGTCTGCCCTCGCGGCAGACCTCCGGGGCGCCGATGGACCTGCTCGCGCCGGTGCGGCGCAACTGA
PROTEIN sequence
Length: 480
MGLRGVLAVGCVAAAFSLGVGSPASAMSLREAVTEALTTNPEILQAAENREAVEFELRQARSLYLPTLDLEGSVGIRRLDSPGRRTLGTAGNDLYPNDVGLTLRQTLFDGGDRRSQVQQQAARVDGASFRVLERSEAIALSVAQEYLEIMLQAQIVEAARSNAGFHQQILGDISQSVSGGTLTEADRIQGQERLLSANTRLKEASEDLEAAKIRFMRLVGKPIGKTTNPGSVANAIPRTVEAAIEQARRNNPRIAAAGADADAADALVRGANAPFMPNISLEGTARVGDDVDGSDGYTSDLQARVVARWNLYRGGRDIAAKQERIRRAGEQRQALAVTHREVEETIRDAWNQRAKRAELASMLRDQASTNARLVSSYREQFRVGERSLLDVLGAQNTRFNSAVLAQTAAYASLFAEYRLLAAMGGLAKTLKTPTLEQGDAYARKEFRVPVADAAPSYERLPSRQTSGAPMDLLAPVRRN*