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SCNpilot_cont_300_bf_scaffold_165_curated

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Displaying items 1-30 of 136 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_165_curated_1
unknown

Not on your lists

2..595
DNA (594bp) protein (198aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_165_curated_2
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(432..1157)
DNA (726bp) protein (242aa)
short-chain dehydrogenase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003802087
Uncharacterized protein {ECO:0000313|EMBL:EJL58431.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_300_bf_scaffold_165_curated_3
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1250..1627
DNA (378bp) protein (126aa)
HxlR family transcriptional regulator n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037A27C0
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ACD20959.1}; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phytofirmans (strain DSM 17436 / PsJN).;"
SCNpilot_cont_300_bf_scaffold_165_curated_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1650..2708)
DNA (1059bp) protein (353aa)
ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHN6_RHITR
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGB69589.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_165_curated_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2715..3503)
DNA (789bp) protein (263aa)
ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHS0_RHITR
ABC transporter, permease protein
ABC transporter, permease protein {ECO:0000313|EMBL:AGB69590.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_165_curated_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3506..4330)
DNA (825bp) protein (275aa)
ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFZ5_RHITR
ABC transporter, permease protein
ABC transporter, permease protein {ECO:0000313|EMBL:AGB69591.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_165_curated_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4377..5414)
DNA (1038bp) protein (346aa)
ABC transporter, substrate-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LEP0_RHITR
ABC transporter, substrate-binding protein
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AGB69592.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_165_curated_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5685..7562
DNA (1878bp) protein (626aa)
Adenine deaminase {ECO:0000256|SAAS:SAAS00006067}; EC=3.5.4.2 {ECO:0000256|SAAS:SAAS00006067};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Adenine deaminase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LE06_RHITR
adenine deaminase
SCNpilot_cont_300_bf_scaffold_165_curated_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7785..8627
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHP0_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB69594.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_165_curated_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8966..9754
DNA (789bp) protein (263aa)
Diguanylate cyclase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHS5_RHITR
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AGB69595.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_165_curated_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9867..10457
DNA (591bp) protein (197aa)
Sigma-54 factor, interaction region n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFZ9_RHITR
sigma-54 factor, interaction region
Sigma-54 factor, interaction region {ECO:0000313|EMBL:AGB69596.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_165_curated_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10628..11077
DNA (450bp) protein (150aa)
Transcriptional regulator, MucR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LEP4_RHITR
transcriptional regulator, MucR family
Transcriptional regulator, MucR family {ECO:0000313|EMBL:AGB69597.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_165_curated_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11283..12890)
DNA (1608bp) protein (536aa)
Putative low-affinity inorganic phosphate transporter n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LE08_RHITR
putative low-affinity inorganic phosphate transporter
Putative low-affinity inorganic phosphate transporter {ECO:0000313|EMBL:AGB69598.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_165_curated_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13478..14062)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHT1_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB69600.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_165_curated_15
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14139..14879)
DNA (741bp) protein (247aa)
Putative transmembrane protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LG02_RHITR
putative transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:AGB69601.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_165_curated_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14892..15101)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LEP9_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB69602.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_165_curated_17
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15326..15910
DNA (585bp) protein (195aa)
Phosphoglycerate mutase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LE13_RHITR
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:AGB69603.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_165_curated_18
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16009..16773)
DNA (765bp) protein (255aa)
Putative cytochrome c oxidase biogenesis protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHP9_RHITR
putative cytochrome c oxidase biogenesis protein
Putative cytochrome c oxidase biogenesis protein {ECO:0000313|EMBL:AGB69604.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_165_curated_19
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16962..17366)
DNA (405bp) protein (135aa)
Cytochrome o ubiquinol oxidase subunit IV n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHT6_RHITR
cyoD; cytochrome o ubiquinol oxidase subunit IV
Cytochrome o ubiquinol oxidase subunit IV {ECO:0000313|EMBL:AGB69605.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_165_curated_20
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17363..17992)
DNA (630bp) protein (210aa)
Cytochrome o ubiquinol oxidase subunit III n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U291_9RHIZ
Cytochrome o ubiquinol oxidase subunit III {ECO:0000313|EMBL:ENN84478.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
cyoC; cytochrome o ubiquinol oxidase subunit III
SCNpilot_cont_300_bf_scaffold_165_curated_21
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17998..20001)
DNA (2004bp) protein (668aa)
Cytochrome o ubiquinol oxidase subunit I n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LEQ4_RHITR
cyoB; cytochrome o ubiquinol oxidase subunit I
Cytochrome o ubiquinol oxidase subunit I {ECO:0000313|EMBL:AGB69607.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_165_curated_22
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20049..21107)
DNA (1059bp) protein (353aa)
Ubiquinol oxidase subunit 2 (Ubiquinol oxidasepolypeptide II) (Cytochrome o subunit 2) (Oxidase BO(3) subunit 2) (Cytochrome o ubiquinol oxidase subunit 2) (Ubiquinol oxidase chainB) n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LE18_RHITR
ubiquinol oxidase subunit 2 (ubiquinol oxidasepolypeptide II) (cytochrome o subunit 2) (oxidase BO(3) subunit 2) (cytochrome o ubiquinol oxidase subunit 2) (ubiquinol oxidase chainB)
Ubiquinol oxidase subunit 2 (Ubiquinol oxidasepolypeptide II) (Cytochrome o subunit 2) (Oxidase BO(3) subunit 2) (Cytochrome o ubiquinol oxidase subunit 2) (Ubiquinol oxidase chainB) {ECO:0000313|EMBL:AGB69608.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_165_curated_23
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21574..22911
DNA (1338bp) protein (446aa)
Major facilitator superfamily (MFS) transporter n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHQ3_RHITR
major facilitator superfamily (MFS) transporter
Major facilitator superfamily (MFS) transporter {ECO:0000313|EMBL:AGB69609.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_165_curated_24
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22968..23672)
DNA (705bp) protein (235aa)
LrgB family protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V031_9RHIZ
LrgB family protein {ECO:0000313|EMBL:ENN84482.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
LrgB family protein
SCNpilot_cont_300_bf_scaffold_165_curated_25
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23659..24066)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U299_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN84483.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
LrgA family protein; K06518 holin-like protein
SCNpilot_cont_300_bf_scaffold_165_curated_26
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24167..25051
DNA (885bp) protein (295aa)
Transcriptional regulatory protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TVL3_9RHIZ
Transcriptional regulatory protein {ECO:0000313|EMBL:ENN84484.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
lysR; transcriptional regulator
SCNpilot_cont_300_bf_scaffold_165_curated_27
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25171..26187
DNA (1017bp) protein (339aa)
Fe(3+) ABC transporter, periplasmic substrate-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHU1_RHITR
Fe(3+) ABC transporter, periplasmic substrate-binding protein
Fe(3+) ABC transporter, periplasmic substrate-binding protein {ECO:0000313|EMBL:AGB69610.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_165_curated_28
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26360..27952
DNA (1593bp) protein (531aa)
Putative iron(III)-transport system permease protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UUN7_9RHIZ
Putative iron(III)-transport system permease protein {ECO:0000313|EMBL:ENN84486.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Fe(3+) ABC transporter, permease protein
SCNpilot_cont_300_bf_scaffold_165_curated_29
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27949..29004
DNA (1056bp) protein (352aa)
Fe(3+) ions import ATP-binding protein FbpC {ECO:0000256|HAMAP-Rule:MF_01706}; EC=3.6.3.30 {ECO:0000256|HAMAP-Rule:MF_01706};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Fe(3+) ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LEQ7_RHITR
Fe(3+) ABC transporter, ATP-binding protein
SCNpilot_cont_300_bf_scaffold_165_curated_30
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29085..30254
DNA (1170bp) protein (390aa)
Putative amidohydrolase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LE21_RHITR
putative amidohydrolase
Putative amidohydrolase {ECO:0000313|EMBL:AGB69613.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying items 1-30 of 136 in total

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