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SCNpilot_cont_300_bf_scaffold_100_curated

Search features with annotation key words

Displaying items 1-30 of 180 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_100_curated_1
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86..400
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1T130_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ31233.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
SCNpilot_cont_300_bf_scaffold_100_curated_2
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(586..1254)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036D108B
Uncharacterized protein {ECO:0000313|EMBL:EJJ30067.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_100_curated_3
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1518..2147
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J3BZC2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KEQ09803.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_100_curated_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2198..4060)
DNA (1863bp) protein (621aa)
Putative ATP-dependent hydrolase protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UBB1_9RHIZ
Putative ATP-dependent hydrolase protein {ECO:0000313|EMBL:ENN89819.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
ATP-dependent Zn protease
SCNpilot_cont_300_bf_scaffold_100_curated_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4057..4371)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Sinorhizobium medicae RepID=UPI00035F81A3
Uncharacterized protein {ECO:0000313|EMBL:KFL30631.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_cont_300_bf_scaffold_100_curated_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4524..4835
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V7L1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN89820.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
helix-turn-helix protein
SCNpilot_cont_300_bf_scaffold_100_curated_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5277..5480
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJX2_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71532.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_100_curated_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5782..6801
DNA (1020bp) protein (340aa)
Transcriptional regulator, AraC family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJF0_RHITR
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AGB71533.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_100_curated_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6842..8173)
DNA (1332bp) protein (444aa)
Two component response regulator n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN51_RHITR
two component response regulator
Two component response regulator {ECO:0000313|EMBL:AGB71534.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_100_curated_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8368..9189)
DNA (822bp) protein (274aa)
Two-component response regulator protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN88_RHITR
two-component response regulator protein
Two-component response regulator protein {ECO:0000313|EMBL:AGB71535.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_100_curated_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9347..11941)
DNA (2595bp) protein (865aa)
Small-conductance mechanosensitive channel n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLF1_RHITR
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:AGB71536.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
small-conductance mechanosensitive channel
SCNpilot_cont_300_bf_scaffold_100_curated_12
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12223..13239)
DNA (1017bp) protein (339aa)
Hemin transport system permease protein HmuU n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QHV3_9RHIZ
Transmembrane permease component of heme ABC transporter {ECO:0000313|EMBL:AHK44688.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
Fe3+ ABC transporter permease; K02015 iron complex transport system permease protein
SCNpilot_cont_300_bf_scaffold_100_curated_13
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13302..14261)
DNA (960bp) protein (320aa)
ABC transporter substrate binding protein (Iron) n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K021_AGRVS
ABC transporter substrate binding protein (iron); K02016 iron complex transport system substrate-binding protein
ABC transporter substrate binding protein (Iron) {ECO:0000313|EMBL:ACM38219.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_cont_300_bf_scaffold_100_curated_14
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14282..15061)
DNA (780bp) protein (260aa)
ABC transporter nucleotide binding/ATPase (iron); K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
ABC transporter related protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F7I4_9RHIZ
Iron ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDP76271.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
SCNpilot_cont_300_bf_scaffold_100_curated_15
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15071..15484)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F7I5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EHS51255.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_100_curated_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16000..17415)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJX8_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71537.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_100_curated_17
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18130..19347
DNA (1218bp) protein (406aa)
Acyl-CoA dehydrogenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN56_RHITR
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGB71539.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_100_curated_18
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19370..19837)
DNA (468bp) protein (156aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN91_RHITR
transcriptional regulator, BadM/Rrf2 family
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:AGB71540.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_100_curated_19
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20044..21504)
DNA (1461bp) protein (487aa)
FAD dependent oxidoreductase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLF6_RHITR
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:AGB71541.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_100_curated_20
unknown

Not on your lists

21810..21914
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_100_curated_21
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(22029..22799)
DNA (771bp) protein (257aa)
Streptomycin 3''-adenylyltransferase, putative (EC:2.7.7.47)
Streptomycin 3''-adenylyltransferase, putative {ECO:0000313|EMBL:EEF23115.1}; EC=2.7.7.47 {ECO:0000313|EMBL:EEF23115.1};; Flags: Fragment;; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
Streptomycin 3''-adenylyltransferase, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TLZ9_RICCO
SCNpilot_cont_300_bf_scaffold_100_curated_22
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23110..23232
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJG2_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71543.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_100_curated_23
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23409..23705
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN63_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71544.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_100_curated_24
unknown

Not on your lists

23952..24140
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_100_curated_25
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24578..25507)
DNA (930bp) protein (310aa)
Putative phenazine antibiotic biosynthesis protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U4W5_9RHIZ
Putative phenazine antibiotic biosynthesis protein {ECO:0000313|EMBL:ENN87649.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
phenazine biosynthesis protein PhzF family
SCNpilot_cont_300_bf_scaffold_100_curated_26
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25564..26304)
DNA (741bp) protein (247aa)
Nudix hydrolase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJY8_RHITR
nudix hydrolase
Nudix hydrolase {ECO:0000313|EMBL:AGB71547.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_100_curated_27
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26301..27416)
DNA (1116bp) protein (372aa)
Putative endonuclease/exonuclease/phosphatase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJG7_RHITR
putative endonuclease/exonuclease/phosphatase
Putative endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:AGB71548.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_100_curated_28
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27465..28460)
DNA (996bp) protein (332aa)
2OG-Fe(II) oxygenase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V9G6_9RHIZ
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:ENN87652.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
oxidoreductase, 2OG-Fe(II) oxygenase family
SCNpilot_cont_300_bf_scaffold_100_curated_29
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28538..29569)
DNA (1032bp) protein (344aa)
Iron(III) ABC transporter, ATP-binding protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UBX9_9RHIZ
Iron(III) ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ENN87653.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Fe(3+) ABC transporter, ATP-binding protein
SCNpilot_cont_300_bf_scaffold_100_curated_30
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29557..31251)
DNA (1695bp) protein (565aa)
Molybdenum (Or ferric iron) transport system permease protein ModB n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U4X1_9RHIZ
Molybdenum (Or ferric iron) transport system permease protein ModB {ECO:0000313|EMBL:ENN87654.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Fe(3+) ABC transporter, permease protein
Displaying items 1-30 of 180 in total

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