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SCNpilot_cont_300_bf_scaffold_331_curated

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Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_331_curated_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28..447)
DNA (420bp) protein (140aa)
Integrase catalytic region n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6Y259_RHIRD
Integrase catalytic region {ECO:0000313|EMBL:EHH02113.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
integrase catalytic region
SCNpilot_cont_300_bf_scaffold_331_curated_2
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(827..2569)
DNA (1743bp) protein (581aa)
Putative glycerol-3-phosphate dehydrogenase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TZ04_9RHIZ
Putative glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:ENN85624.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
FAD dependent oxidoreductase
SCNpilot_cont_300_bf_scaffold_331_curated_3
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2630..4159)
DNA (1530bp) protein (510aa)
Putative L-xylulose kinase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UVE2_9RHIZ
Putative L-xylulose kinase {ECO:0000313|EMBL:ENN85625.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
carbohydrate kinase
SCNpilot_cont_300_bf_scaffold_331_curated_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4214..5056)
DNA (843bp) protein (281aa)
Transcriptional regulator, DeoR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW30_RHITR
transcriptional regulator, DeoR family
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:AGB74916.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_331_curated_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5239..6186)
DNA (948bp) protein (316aa)
Putative erythritol ABC transporter, substrate-binding protein EryG n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXR4_RHITR
putative erythritol ABC transporter, substrate-binding protein EryG
Putative erythritol ABC transporter, substrate-binding protein EryG {ECO:0000313|EMBL:AGB74915.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_331_curated_6
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6288..7340)
DNA (1053bp) protein (351aa)
Ribose ABC transporter n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JN28_AGRRK
ribose ABC transporter; K10440 ribose transport system permease protein
Sugar ABC transporter permease {ECO:0000313|EMBL:KEA03517.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
SCNpilot_cont_300_bf_scaffold_331_curated_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7363..8907)
DNA (1545bp) protein (515aa)
Putative erythritol ABC transporter, ATP-binding protein EryE n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUE3_RHITR
putative erythritol ABC transporter, ATP-binding protein EryE
Putative erythritol ABC transporter, ATP-binding protein EryE {ECO:0000313|EMBL:AGB74913.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_331_curated_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8904..9560)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUK0_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB74912.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_331_curated_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10462..12012
DNA (1551bp) protein (517aa)
Carbohydrate kinase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXQ9_RHITR
carbohydrate kinase
Carbohydrate kinase {ECO:0000313|EMBL:AGB74910.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_331_curated_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12085..13596
DNA (1512bp) protein (504aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Aerobic glycerol-3-phosphate dehydrogenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXM1_RHITR
aerobic glycerol-3-phosphate dehydrogenase
SCNpilot_cont_300_bf_scaffold_331_curated_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13624..14556
DNA (933bp) protein (311aa)
D-erythrulose-1-phosphate dehydrogenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUD7_RHITR
D-erythrulose-1-phosphate dehydrogenase
D-erythrulose-1-phosphate dehydrogenase {ECO:0000313|EMBL:AGB74908.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_331_curated_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14685..15623
DNA (939bp) protein (313aa)
Central glycolytic genes regulator n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUJ5_RHITR
central glycolytic genes regulator
Central glycolytic genes regulator {ECO:0000313|EMBL:AGB74907.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_331_curated_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15738..16514
DNA (777bp) protein (259aa)
Transcriptional regulator, DeoR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW20_RHITR
transcriptional regulator, DeoR family
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:AGB74906.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_331_curated_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16511..17281
DNA (771bp) protein (257aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Triosephosphate isomerase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXQ4_RHITR
tpiA2; triosephosphate isomerase
SCNpilot_cont_300_bf_scaffold_331_curated_15
Pseudomonas sp. EGD-AK9, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17422..18489
DNA (1068bp) protein (356aa)
Transposase n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U1ZSQ6_9PSED
Transposase {ECO:0000313|EMBL:ERI50685.1}; TaxID=1386078 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. EGD-AK9.;"
putative transposase
SCNpilot_cont_300_bf_scaffold_331_curated_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18757..19212
DNA (456bp) protein (152aa)
Ribose-5-phosphate isomerase B n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXL6_RHITR
ribose-5-phosphate isomerase B
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:AGB74904.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_331_curated_17
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20174..21184)
DNA (1011bp) protein (337aa)
Exopolysaccharide polymerization protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUD2_RHITR
exopolysaccharide polymerization protein
Exopolysaccharide polymerization protein {ECO:0000313|EMBL:AGB74903.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_331_curated_18
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21241..22725)
DNA (1485bp) protein (495aa)
Polysaccharide biosynthesis protein PssL n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUJ1_RHITR
polysaccharide biosynthesis protein PssL
Polysaccharide biosynthesis protein PssL {ECO:0000313|EMBL:AGB74902.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_331_curated_19
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23475..24467
DNA (993bp) protein (331aa)
UDP-glucose 4-epimerase ExoB {ECO:0000313|EMBL:EYR83376.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EYR83376.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
UDP-glucose 4-epimerase ExoB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUC9_9RHIZ
SCNpilot_cont_300_bf_scaffold_331_curated_20
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24663..25535)
DNA (873bp) protein (291aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW15_RHITR
glycerophosphoryl diester phosphodiesterase
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:AGB74901.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_331_curated_21
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25773..26900
DNA (1128bp) protein (376aa)
Transcriptional regulator, ROK family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXP9_RHITR
transcriptional regulator, ROK family
Transcriptional regulator, ROK family {ECO:0000313|EMBL:AGB74900.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_331_curated_22
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27618..28265
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXL1_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB74899.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_331_curated_23
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28303..29280)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUC6_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB74898.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_331_curated_24
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29483..29818
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUI6_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB74897.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_331_curated_25
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29806..30480)
DNA (675bp) protein (225aa)
Transglutaminase family protein cysteine peptidase, btlcp n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW10_RHITR
transglutaminase family protein cysteine peptidase, btlcp
Transglutaminase family protein cysteine peptidase, btlcp {ECO:0000313|EMBL:AGB74896.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_331_curated_26
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30999..33077)
DNA (2079bp) protein (693aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXK6_RHITR
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AGB74894.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_331_curated_27
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33538..34863
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUC1_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB74893.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_331_curated_28
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34897..35304)
DNA (408bp) protein (136aa)
Transcriptional regulator n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUI1_RHITR
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGB74892.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_331_curated_29
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35547..36458)
DNA (912bp) protein (304aa)
Transcriptional regulator, LysR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW05_RHITR
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGB74891.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_331_curated_30
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36596..37705
DNA (1110bp) protein (370aa)
Norsolorinic acid reductase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXN9_RHITR
norsolorinic acid reductase
Norsolorinic acid reductase {ECO:0000313|EMBL:AGB74890.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying items 1-30 of 106 in total

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