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SCNpilot_cont_300_bf_scaffold_2541_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2541_curated_1
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(159..575)
DNA (417bp) protein (139aa)
PilT protein domain-containing protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VLI2_9RHIZ
PilT protein domain-containing protein {ECO:0000313|EMBL:EJZ18530.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
PilT-like protein
SCNpilot_cont_300_bf_scaffold_2541_curated_2
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(572..814)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VI01_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJZ18531.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2541_curated_3
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1266..2054
DNA (789bp) protein (263aa)
Uncharacterized protein {ECO:0000313|EMBL:GAJ96276.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
SCNpilot_cont_300_bf_scaffold_2541_curated_4
unknown

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comp(2185..2391)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2541_curated_5
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2825..3226)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A736_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD50558.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2541_curated_6
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3268..3720)
DNA (453bp) protein (151aa)
Putative MarR family transcriptional regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZYU6_9SPHN
Putative MarR family transcriptional regulator {ECO:0000313|EMBL:GAD50559.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
putative transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2541_curated_7
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4410..5327)
DNA (918bp) protein (306aa)
Putative DNA-binding transcriptional regulator n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q2T1_9RHIZ
Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CCM78940.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
LysR substrate-binding protein
SCNpilot_cont_300_bf_scaffold_2541_curated_8
Azotobacter vinelandii, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5825..6271
DNA (447bp) protein (149aa)
Uncharacterized protein n=3 Tax=Azotobacter vinelandii RepID=M9Y6U1_AZOVI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO79727.1}; TaxID=322710 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter vinelandii (strain DJ / ATCC BAA-1303).;"
SCNpilot_cont_300_bf_scaffold_2541_curated_9
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6656..7342)
DNA (687bp) protein (229aa)
GntR family transcriptional regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YH54_9RHIZ
GntR family transcriptional regulator {ECO:0000313|EMBL:EHH08383.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
bphR; GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2541_curated_10
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7481..7804
DNA (324bp) protein (108aa)
gentisate 1,2-dioxygenase (EC:1.13.11.4); K00450 gentisate 1,2-dioxygenase [EC:1.13.11.4]
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EDY8_9BACT
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Displaying 10 items

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