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SCNpilot_cont_300_bf_scaffold_5_curated_24

Organism: scnpilot_dereplicated_Rhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 24716..25420

Top 3 Functional Annotations

Value Algorithm Source
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component n=1 Tax=Rhizobium sp. CF142 RepID=J2B2M6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 234.0
  • Bit_score: 364
  • Evalue 1.00e-97
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component {ECO:0000313|EMBL:EJJ30180.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 234.0
  • Bit_score: 364
  • Evalue 1.40e-97
ABC transporter; K02032 peptide/nickel transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 238.0
  • Bit_score: 352
  • Evalue 7.40e-95

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGAACGCGCTCTCGATATCCGATCTTTCCATCACCTTTTCCGGTGCGAGGAAGGCGTTTACGGCCGTGCGTGGTGTCAGCTTCGATGTGGCGCGCGGCGAAACCTTTGGTCTCATCGGGCCATCCGGTTGCGGCAAGACGACGGTTCTGCGTGCCATCGCCGGGCTGAATATCCATTGGCAAGGAGCGATCTCCGTCTTCAACGATCCGCTGCAGCCGGGCAAGAAGATTTCAGGCCCCTTGCGCGACAATATTCAGATGGTGTTCCAGGACCCCTATTCCTCTCTGCATCCGCGTCACACGATCGCGCGGATTCTCGGCGAGCCCCTGGCGTTGCGAGGTGCCGGGGATATCGCGGCACAGGTGCGGACAGCTCTCGATCAGGTCGGCCTGCCTGCGGCGGCGAGCCAGCGCTATCCGCATCAGCTGTCCGGCGGCCAGCGCCAGCGTGTGGCGATCGCGCGGGCGCTGCTGTTGCGCCCGAACCTGTTGCTGCTCGACGAACCGACCTCGGCGCTCGATGTCTCGGTTCAGGCAGGAATTCTCAATCTCCTCAACGATCTGAAGGCGGCGCACGGGATGACCTTCGTGCTCGTCAGCCATGATCCGGGCGTCGTCGGCCATATGTGCGATCGCGCCGCCATCATGGGAGGCGGCGTCATCACGCAGATATTGGATCGCGCTGGCCTATCCAAGGCCGGCTAG
PROTEIN sequence
Length: 235
MNALSISDLSITFSGARKAFTAVRGVSFDVARGETFGLIGPSGCGKTTVLRAIAGLNIHWQGAISVFNDPLQPGKKISGPLRDNIQMVFQDPYSSLHPRHTIARILGEPLALRGAGDIAAQVRTALDQVGLPAAASQRYPHQLSGGQRQRVAIARALLLRPNLLLLDEPTSALDVSVQAGILNLLNDLKAAHGMTFVLVSHDPGVVGHMCDRAAIMGGGVITQILDRAGLSKAG*