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SCNpilot_cont_300_bf_scaffold_5_curated

Search features with annotation key words

Displaying items 1-30 of 577 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_5_curated_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68..1498)
DNA (1431bp) protein (477aa)
Transcriptional regulator, GntR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LZ40_RHITR
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AGB75409.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_5_curated_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1645..3024)
DNA (1380bp) protein (460aa)
Aminotransferase class-III n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVU4_RHITR
aminotransferase class-III
Aminotransferase class-III {ECO:0000313|EMBL:AGB75408.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_5_curated_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3055..4551)
DNA (1497bp) protein (499aa)
Succinate-semialdehyde dehydrogenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVZ2_RHITR
succinate-semialdehyde dehydrogenase
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:AGB75407.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_5_curated_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4672..5187)
DNA (516bp) protein (172aa)
Leucine-responsive regulatory protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXH5_RHITR
leucine-responsive regulatory protein
Leucine-responsive regulatory protein {ECO:0000313|EMBL:AGB75406.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_5_curated_5
unknown

Not on your lists

comp(5252..5368)
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5_curated_6
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5963..6892
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003B743CF
Uncharacterized protein {ECO:0000313|EMBL:KDP73403.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5_curated_7
unknown

Not on your lists

6996..7187
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5_curated_8
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7331..8002
DNA (672bp) protein (224aa)
transcriptional regulator n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI00039F551E
Transcriptional regulator {ECO:0000313|EMBL:KDP73401.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
two-component response regulator
SCNpilot_cont_300_bf_scaffold_5_curated_9
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7999..9369
DNA (1371bp) protein (457aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
histidine kinase n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI00039F5C20
two-component sensor kinase
SCNpilot_cont_300_bf_scaffold_5_curated_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9528..11573)
DNA (2046bp) protein (682aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXU3_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB74989.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_5_curated_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12009..13226)
DNA (1218bp) protein (406aa)
Putative peptidase S41 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LRF2_RHITR
putative peptidase S41
Putative peptidase S41 {ECO:0000313|EMBL:AGB72714.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_5_curated_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13467..13613
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVY8_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB74295.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_5_curated_13
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13917..14240)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UUP6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN85410.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5_curated_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14578..15123
DNA (546bp) protein (182aa)
Glycine-rich protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSL7_RHITR
glycine-rich protein
Glycine-rich protein {ECO:0000313|EMBL:AGB74298.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_5_curated_15
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15117..15761)
DNA (645bp) protein (215aa)
DegU-like transcriptional regulatory protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVX0_RHITR
DegU-like transcriptional regulatory protein
DegU-like transcriptional regulatory protein {ECO:0000313|EMBL:AGB74299.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_5_curated_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15758..17191)
DNA (1434bp) protein (478aa)
Sensory transduction protein kinase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVZ3_RHITR
sensory transduction protein kinase
Sensory transduction protein kinase {ECO:0000313|EMBL:AGB74300.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_5_curated_17
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17474..18127
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUB8_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB74301.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_5_curated_18
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18372..18770)
DNA (399bp) protein (133aa)
Putative lipoprotein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSM2_RHITR
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AGB74303.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_5_curated_19
unknown

Not on your lists

comp(19850..20029)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5_curated_20
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20379..21965
DNA (1587bp) protein (529aa)
Extracellular solute-binding protein n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DN99_9RHIZ
Extracellular solute-binding protein {ECO:0000313|EMBL:EJT04541.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_5_curated_21
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21966..23048
DNA (1083bp) protein (361aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Rhizobium sp. CF142 RepID=J2L9J5_9RHIZ
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EJJ30177.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
ABC transporter permease; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_300_bf_scaffold_5_curated_22
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23045..23902
DNA (858bp) protein (286aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Rhizobium sp. CF142 RepID=J1SY61_9RHIZ
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EJJ30178.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
ABC transporter permease; K02034 peptide/nickel transport system permease protein
SCNpilot_cont_300_bf_scaffold_5_curated_23
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23895..24719
DNA (825bp) protein (275aa)
ABC transporter related n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6AUQ9_RHILS
ABC transporter
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component {ECO:0000313|EMBL:EJJ30179.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
SCNpilot_cont_300_bf_scaffold_5_curated_24
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24716..25420
DNA (705bp) protein (235aa)
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component n=1 Tax=Rhizobium sp. CF142 RepID=J2B2M6_9RHIZ
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component {ECO:0000313|EMBL:EJJ30180.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
ABC transporter; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_5_curated_25
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25485..25850)
DNA (366bp) protein (122aa)
CheW-like protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUC9_RHITR
CheW-like protein
CheW-like protein {ECO:0000313|EMBL:AGB74311.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_5_curated_26
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26099..26920)
DNA (822bp) protein (274aa)
Fatty acid hydroxylase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSV6_RHITR
fatty acid hydroxylase
Fatty acid hydroxylase {ECO:0000313|EMBL:AGB74312.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_5_curated_27
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27079..28281)
DNA (1203bp) protein (401aa)
Efflux ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSN3_RHITR
efflux ABC transporter, permease protein
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:AGB74313.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_5_curated_28
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28287..29429)
DNA (1143bp) protein (381aa)
Efflux ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVY3_RHITR
efflux ABC transporter, permease protein
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:AGB74314.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_5_curated_29
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29429..30124)
DNA (696bp) protein (232aa)
Efflux ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW06_RHITR
efflux ABC transporter, ATP-binding protein
Efflux ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGB74315.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_5_curated_30
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30121..31260)
DNA (1140bp) protein (380aa)
Putative auxiliary transport protein, MFP family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUD4_RHITR
putative auxiliary transport protein, MFP family
Putative auxiliary transport protein, MFP family {ECO:0000313|EMBL:AGB74316.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying items 1-30 of 577 in total

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