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SCNpilot_cont_300_bf_scaffold_5_curated_27

Organism: scnpilot_dereplicated_Rhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(27079..28281)

Top 3 Functional Annotations

Value Algorithm Source
Efflux ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSN3_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 400.0
  • Bit_score: 617
  • Evalue 8.80e-174
efflux ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 400.0
  • Bit_score: 617
  • Evalue 2.80e-174
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:AGB74313.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 400.0
  • Bit_score: 617
  • Evalue 1.20e-173

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1203
ATGTCCATCCAAATCAGGCAGATCATCGTCGCAACCAGAACCACGCTCGGCAGTATAAAGCGGCGCAAGGCTATTTCGGTCTCGATGGCACTCTCGGTATCGCTCGTCGTCATGGTGCTTACAGGTTTCCTTGCCATGGCGGACGGTTTCGAGAAGGCCTTGAGCGGGACCGGTTCGCCGCTGGTCGCCGTCATCCTCGGAGGTGGCACGAACCGGGAAACCGGCTCGGATGTCCCCGCCGATGCGATCCGCAGCCTCAAGGCAAGCGCTGACAATATCGGTGCGCTTCGCAATGTGTCAGGAGACCTTGTCGCATCCCGCGAGCTGGTGGTCCCGGTCGATGTCTTCGGCACAGGGGACAAGACTTCCAGGACTTTGGCCCTGCGCGGCATGGACGCAAGCGGCCTCTCGATCCGGGACGGCATTACCCTCTTCGAGGGAAGGCTGTTTGCGCCCGGCGCCAGAGAAATCGTCGTCGGCGCGAGCATTGTCCGCGACTATCCCGGCTTCGGTATCGGCGCCAAGGTGCGGTTGGGCGCTGTCGACTGGACGGTCGTCGGACATTTCGCCGCCAATGGCAGCGCGTTCGAGTCCGAAATCTGGAGCGACATCGACGCGGTGCGTGCCGCCTTCGACCGACAGGGAGAGGTGCAAAGCCTGCGGTTGCGGCTCATCGAGCAACCTTCCCTTGCCACGTTGAACGCGAAGCTGGCGACGATGACCGGGATACCGCTGACCGCCGTATCCGAGGCCACGCTCTATGCGGCACAGGCCGGACGCACCTCCGATCTCATCCGCCTGTTCGGATGGCCGATCGCCTTGCTGATGGCGATCGGAGCAACCGCCGGCGCGCTCAATACGATGATGAGTTCGATTTCGGACAGAACGGTCGAGATCGCGACCTTGCGGGCACTGGGCTTCAGCCGCCTGTCCGCCTTTCTGGCAACCTGGCTCGAAGCAAGCTTGTTGGCTGCAGCCGGCACCGGCATCGGCGTATTGGCGTCGCGGCTCGTCTTCGACGGATGGCAAGCCAGCACCATCGGGGCCAATGATACCAGCATGGCCTTTCAGCTTACTCTGAGCTTCGATGCCATGCTGACCGGTGGCCTGCTCGGCCTTGCAATCGGGCTTGTCGGCGGCGCGCTTCCCGCCTTGGCCGCTAGCCGGCTGCCGTTGATTGCTGCACTGAGAGCCCGTGGATAG
PROTEIN sequence
Length: 401
MSIQIRQIIVATRTTLGSIKRRKAISVSMALSVSLVVMVLTGFLAMADGFEKALSGTGSPLVAVILGGGTNRETGSDVPADAIRSLKASADNIGALRNVSGDLVASRELVVPVDVFGTGDKTSRTLALRGMDASGLSIRDGITLFEGRLFAPGAREIVVGASIVRDYPGFGIGAKVRLGAVDWTVVGHFAANGSAFESEIWSDIDAVRAAFDRQGEVQSLRLRLIEQPSLATLNAKLATMTGIPLTAVSEATLYAAQAGRTSDLIRLFGWPIALLMAIGATAGALNTMMSSISDRTVEIATLRALGFSRLSAFLATWLEASLLAAAGTGIGVLASRLVFDGWQASTIGANDTSMAFQLTLSFDAMLTGGLLGLAIGLVGGALPALAASRLPLIAALRARG*