name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_2151_curated_1
CG_Gallio_02, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
275..598
|
hypothetical protein n=1 Tax=Methylotenera mobilis RepID=UPI00037482E7
hypothetical protein
Tax=CG_Gallio_02
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_2
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1427..2443)
|
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18); K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18]
Anthranilate phosphoribosyltransferase n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XPM7_RHIRD
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_3
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2463..2609)
|
ppiD1; peptidyl prolyl cis-trans isomerase D signal peptide protein (EC:5.2.1.8); K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037BB093
Folding chaperone domain-containing protein {ECO:0000313|EMBL:AGS21967.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2645..3112)
|
Peptidyl prolyl cis-trans isomerase D signal peptide protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ12_RHITR
peptidyl prolyl cis-trans isomerase D signal peptide protein
Peptidyl prolyl cis-trans isomerase D signal peptide protein {ECO:0000313|EMBL:AGB71227.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_5
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3252..4295)
|
Peptidyl-prolyl cis-trans isomerase D {ECO:0000313|EMBL:CDM58084.1}; EC=5.2.1.8 {ECO:0000313|EMBL:CDM58084.1};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
ppiD1; peptidyl-prolyl cis-trans isomerase D signal peptide protein (EC:5.2.1.8); K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003686E35
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_6
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4503..4769
|
Uncharacterized protein n=1 Tax=Rhizobium sp. CF122 RepID=J2J087_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDM58085.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_7
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4903..5538
|
Protein ExoD n=8 Tax=Rhizobium meliloti RepID=EXOD_RHIME
rbh
Exopolysaccharide synthesis ExoD
Protein exoD {ECO:0000313|EMBL:CDH87695.1}; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_8
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5649..6368
|
nuclease n=1 Tax=Rhizobium radiobacter RepID=UPI000381B6B6
Nuclease {ECO:0000313|EMBL:KDR90853.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
conserved exported protein of unknown function
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_9
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6455..7687)
|
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2ILP6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EUC00216.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_10
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8336..9262)
|
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000374E3D5
DMT superfamily inner membrane transporter protein {ECO:0000313|EMBL:AJD43990.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_11
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9490..10122
|
Transacetylase n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XWC3_RHIRD
Transacetylase {ECO:0000313|EMBL:EHH05408.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
transacetylase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_12
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10258..10563
|
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NCW0_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF18905.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_13
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10718..11782)
|
UPI0003CFB03A related cluster n=1 Tax=unknown RepID=UPI0003CFB03A
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESZ68103.1}; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C119B0.;"
ABC transporter-like protein
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_14
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11853..12578)
|
oxidoreductase n=1 Tax=Rhizobium gallicum RepID=UPI0003733D5C
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EHK76289.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
short-chain dehydrogenase/reductase SDR
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_15
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12691..14190)
|
ABC transporter substrate-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00038079B2
Extracellular solute-binding protein {ECO:0000313|EMBL:EMS95644.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_16
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14284..14514)
|
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8ABH8_RHIRD
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:EMS95643.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_17
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15113..16000)
|
ABC transporter permease n=1 Tax=Rhizobium gallicum RepID=UPI00035C5CAD
ABC transporter permease {ECO:0000313|EMBL:AHF87494.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
binding-protein-dependent transport system inner membrane protein; K02025 multiple sugar transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_18
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16214..17488)
|
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
glpD; glycerol-3-phosphate dehydrogenase; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
Glycerol-3-phosphate dehydrogenase n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0G325_RHIML
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_19
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18563..19918)
|
3-dehydroquinate synthase n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UD01_SINMW
3-dehydroquinate synthase
3-dehydroquinate synthase {ECO:0000313|EMBL:ABR61531.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_20
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20006..21022
|
hypothetical protein n=1 Tax=Rhizobium RepID=UPI00035F9A63
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ABR61532.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_21
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21143..22654
|
carbohydrate kinase FGGY; K00854 xylulokinase [EC:2.7.1.17]
hypothetical protein n=1 Tax=Rhizobium gallicum RepID=UPI000371335D
Xylulokinase {ECO:0000313|EMBL:AHF87489.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_22
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22709..23752)
|
Putative D-xylulose reductase {ECO:0000313|EMBL:CDM61428.1}; EC=1.1.1.9 {ECO:0000313|EMBL:CDM61428.1};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
Theronine dehydrogenase-like Zn-dependent dehydrogenase n=1 Tax=Rhizobium sp. CF122 RepID=J2ICL8_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_23
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23932..24246)
|
plasmid stabilization protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037A96EE
Uncharacterized protein {ECO:0000313|EMBL:EYR80977.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_24
unknown
|
Not on your lists |
comp(24308..24562)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_25
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24712..25137
|
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UZR5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN87105.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_26
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25148..26278)
|
tgt; queuine tRNA-ribosyltransferase; K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29]
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
Queuine tRNA-ribosyltransferase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JWX1_AGRVS
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_27
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26278..27360)
|
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Rhizobium sp. CF080 RepID=J3BVA6_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_28
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27364..27813)
|
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NF51_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF19519.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hypothetical protein; K09936 hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_29
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27902..28417)
|
cyclophilin type peptidyl-prolyl cis-trans isomerase; K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
Peptidyl-prolyl cis-trans isomerase n=3 Tax=Rhizobium leguminosarum bv. trifolii RepID=B5ZPR7_RHILW
|
|
SCNpilot_expt_1000_bf_scaffold_2151_curated_30
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28452..28682)
|
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
ppiA; peptidyl prolyl cis-trans isomerase A signal peptide protein (EC:5.2.1.8); K03767 peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhizobium sp. CF122 RepID=J2J045_9RHIZ
|