name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1228_curated_1
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
3..263
|
60 kDa chaperonin (Fragment) n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HPH1_9RHIZ
60 kDa chaperonin {ECO:0000256|RuleBase:RU000419}; Flags: Fragment;; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
groEL; chaperonin GroEL
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SCNpilot_expt_1000_bf_scaffold_1228_curated_2
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
720..1208
|
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9J9Y8_AGRRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJK80078.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
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SCNpilot_expt_1000_bf_scaffold_1228_curated_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1238..1945)
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Glutathione S-transferase family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LG65_RHITR
glutathione S-transferase family protein
Glutathione S-transferase family protein {ECO:0000313|EMBL:AGB70202.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
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SCNpilot_expt_1000_bf_scaffold_1228_curated_4
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2247..2693
|
membrane protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B7674D
DoxX family protein {ECO:0000313|EMBL:AJD40240.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
transmembrane quinol oxidase subunit; K15977 putative oxidoreductase
|
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SCNpilot_expt_1000_bf_scaffold_1228_curated_5
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2857..3552)
|
hisG; ATP phosphoribosyltransferase catalytic subunit (EC:2.4.2.17); K00765 ATP phosphoribosyltransferase [EC:2.4.2.17]
ATP phosphoribosyltransferase; Short=ATP-PRT;; Short=ATP-PRTase;; EC=2.4.2.17;; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
ATP phosphoribosyltransferase n=1 Tax=Rhizobium giardinii RepID=UPI00035C7B0E
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SCNpilot_expt_1000_bf_scaffold_1228_curated_6
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3552..4667)
|
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=HISZ_AGRVS
rbh
hisZ; ATP phosphoribosyltransferase regulatory subunit; K02502 ATP phosphoribosyltransferase regulatory subunit
ATP phosphoribosyltransferase regulatory subunit {ECO:0000255|HAMAP-Rule:MF_00125}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
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SCNpilot_expt_1000_bf_scaffold_1228_curated_7
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4962..5249)
|
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hisS; histidyl-tRNA synthetase; K01892 histidyl-tRNA synthetase [EC:6.1.1.21]
Histidine--tRNA ligase n=1 Tax=Rhizobium sp. RepID=L0NAT4_RHISP
Suspect SCG annotation. See neighboring gene [SCNpilot_expt_1000_bf_scaffold_1228_curated_8].
|
|
SCNpilot_expt_1000_bf_scaffold_1228_curated_8
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5888..6589)
|
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
histidyl-tRNA synthase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036A7254
|
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SCNpilot_expt_1000_bf_scaffold_1228_curated_9
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6717..6950
|
CopG domain protein DNA-binding domain protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F1K1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGD86164.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
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SCNpilot_expt_1000_bf_scaffold_1228_curated_10
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6934..7203
|
Addiction module toxin, RelE/StbE family n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F1K0_9RHIZ
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:EHS53450.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1228_curated_11
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7207..7965
|
Uncharacterized protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VS25_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJZ20355.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1228_curated_12
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8136..8840
|
HAD hydrolase n=1 Tax=Rhizobium leguminosarum RepID=UPI000378B3DE
haloacid dehydrogenase hydrolase; K07025 putative hydrolase of the HAD superfamily
Putative HAD superfamily hydrolase {ECO:0000313|EMBL:EJC69632.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
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SCNpilot_expt_1000_bf_scaffold_1228_curated_13
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8895..9335)
|
Uncharacterized protein n=2 Tax=Rhizobium etli RepID=S5SFL6_RHIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS20674.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
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SCNpilot_expt_1000_bf_scaffold_1228_curated_14
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9332..9961)
|
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:CDM56599.1}; EC=3.2.2.20 {ECO:0000313|EMBL:CDM56599.1};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
tag; DNA-3-methyladenine glycosylase (EC:3.2.2.20)
3-methyladenine DNA glycosylase n=1 Tax=Rhizobium sp. CF122 RepID=J3BHI1_9RHIZ
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|
SCNpilot_expt_1000_bf_scaffold_1228_curated_15
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10174..10941
|
Putative L,D-transpeptidase ErfK/SrfK {ECO:0000313|EMBL:EYR80119.1}; EC=2.-.-.- {ECO:0000313|EMBL:EYR80119.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ybiS; L,D-transpeptidase YbiS (EC:2.-.-.-)
Putative L,D-transpeptidase ErfK/SrfK n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXZ4_9RHIZ
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SCNpilot_expt_1000_bf_scaffold_1228_curated_16
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11083..11775
|
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VZF4_9RHIZ
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EJZ20353.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
hypothetical protein
|
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SCNpilot_expt_1000_bf_scaffold_1228_curated_17
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11890..12639)
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Glycolate oxidase subunit F protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJC4_RHITR
glycolate oxidase subunit F protein
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
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SCNpilot_expt_1000_bf_scaffold_1228_curated_18
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12597..13271)
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2-hydroxy-acid oxidase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037BFB45
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein; K11473 glycolate oxidase iron-sulfur subunit
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SCNpilot_expt_1000_bf_scaffold_1228_curated_19
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13526..14728)
|
2-hydroxy-acid oxidase n=1 Tax=Rhizobium leguminosarum RepID=UPI000377DD7C
2-hydroxy-acid oxidase {ECO:0000313|EMBL:AHF82600.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
FAD linked oxidase; K11472 glycolate oxidase FAD binding subunit
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SCNpilot_expt_1000_bf_scaffold_1228_curated_20
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14725..15795)
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Glycolate oxidase protein, subunit D n=1 Tax=Rhizobium etli CNPAF512 RepID=F2ABG0_RHIET
Glycolate oxidase protein, subunit D {ECO:0000313|EMBL:EGE58196.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
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SCNpilot_expt_1000_bf_scaffold_1228_curated_21
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16571..17155
|
LysR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI000362A9DF
LysR family transcriptional regulator {ECO:0000313|EMBL:EKF59150.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
transcriptional regulator protein
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SCNpilot_expt_1000_bf_scaffold_1228_curated_22
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17197..17451
|
Uncharacterized protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6WWJ7_OCHA4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS13351.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
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SCNpilot_expt_1000_bf_scaffold_1228_curated_23
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17448..17768
|
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QVA2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF59147.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
hicB; putative pilus related protein HicB
|
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SCNpilot_expt_1000_bf_scaffold_1228_curated_24
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17769..19043)
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Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F9R0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EHS50474.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
|
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SCNpilot_expt_1000_bf_scaffold_1228_curated_25
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19200..19988
|
GntR domain protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F9Q9_9RHIZ
regulator of the GntR family
GntR domain protein {ECO:0000313|EMBL:EHS50473.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
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SCNpilot_expt_1000_bf_scaffold_1228_curated_26
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19990..21153)
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adenosylhomocysteinase; K01251 adenosylhomocysteinase [EC:3.3.1.1]
S-adenosylhomocysteine hydrolase n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0BT59_RHILV
S-adenosylhomocysteine hydrolase {ECO:0000313|EMBL:EJC69620.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
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SCNpilot_expt_1000_bf_scaffold_1228_curated_27
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21245..22144)
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Transcriptional regulator n=1 Tax=Rhizobium sp. AP16 RepID=J2WBA1_9RHIZ
HTH-type transcriptional regulator TrpI {ECO:0000313|EMBL:GAJ94890.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
transcriptional regulator protein
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SCNpilot_expt_1000_bf_scaffold_1228_curated_28
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22442..22834
|
NTP pyrophosphohydrolase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0H231_RHILT
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ACI53742.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
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SCNpilot_expt_1000_bf_scaffold_1228_curated_29
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22951..24456
|
Phosphate transporter n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZRA9_RHILW
phosphate transporter; K03306 inorganic phosphate transporter, PiT family
Phosphate transporter {ECO:0000313|EMBL:ACI53741.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
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SCNpilot_expt_1000_bf_scaffold_1228_curated_30
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24516..25253
|
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
16S ribosomal RNA methyltransferase RsmE; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
16S rRNA methyltransferase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000361A1EF
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