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SCNpilot_expt_1000_bf_scaffold_6791_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6791_curated_1
Brucella sp. F5/99, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..321)
DNA (321bp) protein (107aa)
putative enoyl-CoA hydratase/isomerase; K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
Enoyl-CoA hydratase-like protein n=6 Tax=Brucella RepID=C9U1K3_BRUPB
Enoyl-CoA hydratase {ECO:0000313|EMBL:EEY24707.1}; TaxID=437701 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. F5/99.;"
SCNpilot_expt_1000_bf_scaffold_6791_curated_2
Brucella sp. F5/99, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(395..1213)
DNA (819bp) protein (273aa)
caiD; carnitinyl-CoA dehydratase (EC:4.2.1.-); K08299 carnitinyl-CoA dehydratase [EC:4.2.1.-]
Crotonobetainyl-CoA-hydratase n=5 Tax=Brucella RepID=C9U1K4_BRUPB
Crotonobetainyl-CoA-hydratase {ECO:0000313|EMBL:EEY24708.1}; TaxID=437701 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. F5/99.;"
SCNpilot_expt_1000_bf_scaffold_6791_curated_3
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1215..2012)
DNA (798bp) protein (266aa)
Spermidine/putrescine transport system, permease protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YE72_PARAH
spermidine/putrescine transport system, permease protein
Spermidine/putrescine transport system, permease protein {ECO:0000313|EMBL:AGT09783.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCNpilot_expt_1000_bf_scaffold_6791_curated_4
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2025..2948)
DNA (924bp) protein (308aa)
Spermidine/putrescine transport system, permease protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XWU4_PARAH
spermidine/putrescine transport system, permease protein
Spermidine/putrescine transport system, permease protein {ECO:0000313|EMBL:AGT09782.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCNpilot_expt_1000_bf_scaffold_6791_curated_5
Brucella pinnipedialis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2952..4049)
DNA (1098bp) protein (366aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=520462 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella pinnipedialis M292/94/1.;"
Spermidine/putrescine ABC transporter n=6 Tax=Brucella RepID=C9U1K7_BRUPB
spermidine/putrescine ABC transporter ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_6791_curated_6
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4163..4813)
DNA (651bp) protein (217aa)
Spermidine/putrescine transport system, substrate-binding protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y215_PARAH
spermidine/putrescine transport system, substrate-binding protein
Spermidine/putrescine transport system, substrate-binding protein {ECO:0000313|EMBL:AGT09780.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCNpilot_expt_1000_bf_scaffold_6791_curated_7
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5534..7069
DNA (1536bp) protein (512aa)
hypothetical protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3R1T4_RALPI
Uncharacterized protein {ECO:0000313|EMBL:KGD89205.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
SCNpilot_expt_1000_bf_scaffold_6791_curated_8
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7079..7942
DNA (864bp) protein (288aa)
Putative DUF6 family membrane protein n=1 Tax=Octadecabacter arcticus 238 RepID=M9RQR3_9RHOB
putative DUF6 family membrane protein
Putative DUF6 family membrane protein {ECO:0000313|EMBL:AGI74512.1}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter arcticus 238.;"
SCNpilot_expt_1000_bf_scaffold_6791_curated_9
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9148..9492)
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FVY5_RHIML
Putative uncharacterized protein {ECO:0000313|EMBL:EHK78847.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6791_curated_10
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9489..10547)
DNA (1059bp) protein (353aa)
ooxA1; Opine oxidase subunit A (EC:1.-.-.-)
Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FVY6_RHIML
Putative uncharacterized protein {ECO:0000313|EMBL:EHK78848.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
SCNpilot_expt_1000_bf_scaffold_6791_curated_11
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11147..11452)
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FVY7_RHIML
Putative uncharacterized protein {ECO:0000313|EMBL:EHK78849.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6791_curated_12
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11433..12557)
DNA (1125bp) protein (375aa)
ooxB1; Opine oxidase subunit B (EC:1.-.-.-)
Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FVY8_RHIML
Putative uncharacterized protein {ECO:0000313|EMBL:EHK78850.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
SCNpilot_expt_1000_bf_scaffold_6791_curated_13
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12683..13525)
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FVY9_RHIML
Putative uncharacterized protein {ECO:0000313|EMBL:EHK78851.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
occT; Octopine-binding periplasmic protein
SCNpilot_expt_1000_bf_scaffold_6791_curated_14
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13567..13836)
DNA (270bp) protein (90aa)
Octopine permease ATP-binding protein P n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0P988_RHIML
occP; Octopine permease ATP-binding protein P
Amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AHK46972.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
SCNpilot_expt_1000_bf_scaffold_6791_curated_15
unknown

Not on your lists

14166..14276
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6791_curated_16
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14322..15029)
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FVZ1_RHIML
Putative uncharacterized protein {ECO:0000313|EMBL:EHK78853.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
occM1; Octopine transport system permease protein occM
SCNpilot_expt_1000_bf_scaffold_6791_curated_17
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15029..15742)
DNA (714bp) protein (238aa)
Octopine transport system permease protein occQ n=2 Tax=Rhizobium meliloti RepID=K0P434_RHIML
occQ; Octopine transport system permease protein occQ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK78854.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
Displaying 17 items

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