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SCNpilot_expt_1000_bf_scaffold_13459_curated

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_13459_curated_1
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(207..974)
DNA (768bp) protein (256aa)
Outer membrane protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JVK6_AGRVS
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:ACM36286.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_expt_1000_bf_scaffold_13459_curated_2
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1678..3516)
DNA (1839bp) protein (613aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Ribonuclease E n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U017_9RHIZ
ribonuclease E
SCNpilot_expt_1000_bf_scaffold_13459_curated_3
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3902..4645
DNA (744bp) protein (248aa)
Ribonuclease E n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DFY8_BRAJP
ribonuclease E
Ribonuclease E {ECO:0000313|EMBL:BAL10762.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_expt_1000_bf_scaffold_13459_curated_4
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5235..6488
DNA (1254bp) protein (418aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ACS55686.1}; EC=3.5.1.28 {ECO:0000313|EMBL:ACS55686.1};; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhizobium leguminosarum RepID=UPI00036C9929
SCNpilot_expt_1000_bf_scaffold_13459_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6752..7630
DNA (879bp) protein (293aa)
Penicillin-binding protein 1A {ECO:0000313|EMBL:EYR82293.1}; EC=2.4.2.- {ECO:0000313|EMBL:EYR82293.1};; EC=3.4.-.- {ECO:0000313|EMBL:EYR82293.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
mrcA; penicillin binding peptidoglycan synthetase; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-]
Penicillin-binding protein 1A n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EUS6_9RHIZ
Displaying 5 items

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