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SCNpilot_expt_1000_bf_scaffold_10919_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10919_curated_1
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..308)
DNA (306bp) protein (102aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Fragment;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
Signal transduction histidine kinase (Fragment) n=1 Tax=Rhizobium sp. CF142 RepID=J2AVI7_9RHIZ
regM; two-component sensor histidine kinase
SCNpilot_expt_1000_bf_scaffold_10919_curated_2
unknown

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676..792
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10919_curated_3
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1343..2689)
DNA (1347bp) protein (449aa)
Pyridine nucleotide-disulphide oxidoreductase dimerisation region n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CXF6_9RHIZ
Dihydrolipoamide dehydrogenase {ECO:0000313|EMBL:KGF67622.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
SCNpilot_expt_1000_bf_scaffold_10919_curated_4
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2922..3185)
DNA (264bp) protein (88aa)
methyl-accepting chemotaxis protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B4DF81
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AJD39830.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
mcpT; methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein
SCNpilot_expt_1000_bf_scaffold_10919_curated_5
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3416..4729
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Burkholderia cenocepacia H111 RepID=G7HCJ2_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCNpilot_expt_1000_bf_scaffold_10919_curated_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5546..5935
DNA (390bp) protein (130aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.
Ribonuclease P protein component n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UXH2_9RHIZ
rnpA; ribonuclease P protein component
SCNpilot_expt_1000_bf_scaffold_10919_curated_7
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5935..6711
DNA (777bp) protein (259aa)
insertase n=1 Tax=Rhizobium leguminosarum RepID=UPI00036AD5BC
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
oxaA; inner membrane protein translocase component YidC; K03217 preprotein translocase subunit YidC
Displaying 7 items

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