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SCNpilot_expt_1000_bf_scaffold_18020_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_18020_curated_1
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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638..904
DNA (267bp) protein (89aa)
ABC transporter permease n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI000373F595
Iron ABC transporter permease {ECO:0000313|EMBL:EMG51789.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
transport system permease; K02015 iron complex transport system permease protein
SCNpilot_expt_1000_bf_scaffold_18020_curated_2
unknown

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comp(1033..1212)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_18020_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1826..3139)
DNA (1314bp) protein (438aa)
putative Cardiolipin synthetase (Cardiolipin synthase) (CL synthase) cls (EC:2.7.8.-)
Putative Cardiolipin synthetase (Cardiolipin synthase) (CL synthase) cls n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CVK7_THIA3
Cardiolipin synthase {ECO:0000313|EMBL:EYR84583.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_1000_bf_scaffold_18020_curated_4
unknown

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3249..3563
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI000380C76D
SCNpilot_expt_1000_bf_scaffold_18020_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3695..4087)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CH79_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR84582.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_1000_bf_scaffold_18020_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4133..4732)
DNA (600bp) protein (200aa)
Maf-like protein SHLA_1310c00030 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CM64_9RHIZ
Maf-like protein SHLA_2c001460 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
maf; Maf-like protein; K06287 septum formation protein
SCNpilot_expt_1000_bf_scaffold_18020_curated_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4774..4983)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLK3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62894.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_1000_bf_scaffold_18020_curated_8
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4980..5411)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HEI8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11422.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
NADH dehydrogenase, FAD-containing subunit
SCNpilot_expt_1000_bf_scaffold_18020_curated_9
unknown

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5699..6013
DNA (315bp) protein (105aa)

This feature has no annotations

Displaying 9 items

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