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SCNpilot_expt_1000_bf_scaffold_770_curated_4

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(1678..2760)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Rhizobium giardinii RepID=UPI00037FCFED similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 360.0
  • Bit_score: 626
  • Evalue 1.30e-176
Ribose transport system permease protein RbsC {ECO:0000313|EMBL:EYR84048.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 360.0
  • Bit_score: 596
  • Evalue 3.50e-167
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 360.0
  • Bit_score: 592
  • Evalue 1.10e-166

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1083
ATGAGCGAGCCGACAGCAGTTTCGCAGCCAGCCCAGGAGTTCGAGAAGGTCCTGAGCGACAGTTCGCGGCAACTCGCATCGTTCGATACCGACGACAAGACAGCCATCCAGAAACTGCAGCATTTCCTGCATTCGCATCCGGCCGGCGTGCCGCTGATCGTGCTCCTGTTGTCGATCATCATCTTCGGTTCGATCCTCGGCACGAAGTTTTTCTCGGCTTTCTCGCTGACCCTGATCCTGCAGCAGGTGGCCATCACCGGCATCGTCGGGGCGGCGCAGACGCTGGTGATCCTGACCGCCGGCATCGACCTGTCCGTCGGCGCCATCATGGTGCTGTCGTCGGTGGTCATGGGCCAGTTCGTCTTCCGTCTCGGCCTGCCCGTCGAGATCGCCATCCTCTGCGGCTTCGGCGTCGGCGCGCTGTGCGGTTTCGTCAACGGCTGGCTGGCGGCGCGAATGAAGCTGCCACCCTTCATCGTCACGCTCGGCATGTGGCAGATCGTGCTCGCATCCAACTTCCTCTATTCCGCCAACGAGACGATCCGCGCCCAGGATATCAGCGCCACCGCGCCGCTCCTGCAGATCTTCGGCGCCAATATCCGCATCGGCAACGCCGTCTTCACCTATGGCGTCATCGCCATGGTGCTCCTGTCCATCGGCCTCTGGTACGTGCTGAACAAGACCGCCTGGGGTCGCCACGTCTATGCCGTCGGCGACGACCCGGATGCCGCAGAACTTGCCGGCGTCAACGTCAAGAAGATGCTGATGTCGGTCTACGTGCTTTCCGGCCTGATCTGCGCCTTGGCGGGCTGGGCCCTGATCGGCCGCATCGGCTCCGTTTCACCCACCGCCGGCCAGTTCGCCAACATCGAATCCATCACTGCGGTGGTGATCGGCGGCATCTCGCTGTTCGGCGGGCGCGGCTCGATCATGGGCATGCTGTTCGGGGCGCTGATCGTCGGCGTCTTCCAGCTCGGCCTGCGGCTGATCGGCACCGACCCGCAATGGACCTATCTCTTGATCGGCGTGCTGATCATCGCCGCCGTCGCAATCGACCAGTGGATCAGAAAGGTAGCAGGCTGA
PROTEIN sequence
Length: 361
MSEPTAVSQPAQEFEKVLSDSSRQLASFDTDDKTAIQKLQHFLHSHPAGVPLIVLLLSIIIFGSILGTKFFSAFSLTLILQQVAITGIVGAAQTLVILTAGIDLSVGAIMVLSSVVMGQFVFRLGLPVEIAILCGFGVGALCGFVNGWLAARMKLPPFIVTLGMWQIVLASNFLYSANETIRAQDISATAPLLQIFGANIRIGNAVFTYGVIAMVLLSIGLWYVLNKTAWGRHVYAVGDDPDAAELAGVNVKKMLMSVYVLSGLICALAGWALIGRIGSVSPTAGQFANIESITAVVIGGISLFGGRGSIMGMLFGALIVGVFQLGLRLIGTDPQWTYLLIGVLIIAAVAIDQWIRKVAG*