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SCNpilot_expt_1000_bf_scaffold_770_curated_8

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 5968..6672

Top 3 Functional Annotations

Value Algorithm Source
Crp/Fnr family transcriptional regulator n=1 Tax=Rhizobium giardinii RepID=UPI00037E69B8 similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 233.0
  • Bit_score: 349
  • Evalue 3.40e-93
Putative cAMP-binding protein-catabolite activator {ECO:0000313|EMBL:EYR83224.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.0
  • Coverage: 233.0
  • Bit_score: 342
  • Evalue 5.90e-91
Putative cAMP-binding protein-catabolite gene activator similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 233.0
  • Bit_score: 336
  • Evalue 5.50e-90

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGAGTGAAGTGAACAAGAGTCCCGCCTTCTGGCGTTCCTTCCCGATTTTCGAAGAGTTCGACAAGGAAACGATCGCCGAAATCGCGGCCATCGCCACCTATCGCAAATGGTCGCCGGGAACGGTGATCTTCCAGCGCGGCGACGAAGGCAATTACATGATCGCCATCTTCAACGGCCGGGTGAAACTGTCGCTGATCACGCCGCAGGGCAAGGAACTGGCGATCCGCCACATGGAGCCCGGCACCATTCTCGGCGAAATGGCGATCCTCGACGGCGAGCCGCGGTCGGCCGATGCCACGGCCGTGACCGCGACGGAAGGTTATGTGCTCGCCAAGCGCGACCTGCTGCCGATCATCACCGAACGGTCCGAAACGGCCGAGACGGTCATCCGCTTCCTCTGCGCCCGCATCCGCGAGACCACCGAGCGGCTGGAAACCATGGCGCTCTACGATCTCGATTCCCGTGTCGCCCGATTCTTCCTCGCAACGCTGAAACAGATTCACGGCATGGAACTACCCGATCGCGCCAACCTGCAGATGGAGCTCAGCCAGACGGAAATTGCCGCCATCGTCGGCTGCAGCCGGCCGAAGATGAACCGGGCGATCGTTTCCCTGGAAGAGGCAGGCGCGATCTCCCGTAAGGACGGCATCATCTCCTGCCATGTCGACCGGCTCATTCGGGTTGCCGAACCTGATGAGGCATAG
PROTEIN sequence
Length: 235
MSEVNKSPAFWRSFPIFEEFDKETIAEIAAIATYRKWSPGTVIFQRGDEGNYMIAIFNGRVKLSLITPQGKELAIRHMEPGTILGEMAILDGEPRSADATAVTATEGYVLAKRDLLPIITERSETAETVIRFLCARIRETTERLETMALYDLDSRVARFFLATLKQIHGMELPDRANLQMELSQTEIAAIVGCSRPKMNRAIVSLEEAGAISRKDGIISCHVDRLIRVAEPDEA*