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SCNpilot_expt_1000_bf_scaffold_770_curated_10

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(8569..9207)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWD2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 203.0
  • Bit_score: 240
  • Evalue 1.20e-60
Uncharacterized protein {ECO:0000313|EMBL:EYR83226.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 203.0
  • Bit_score: 240
  • Evalue 1.70e-60
FecR protein similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 199.0
  • Bit_score: 227
  • Evalue 4.30e-57

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGACGATGAAATATGCACAACGTACAGTGACACTCCTCACGCGTCGCACGTTGATGGTGGGCGCAGGCGCCATGGCGATCCTGCCTGCCTGGACGCCGGCCCATGCTTCGGCAATCGGCGAGACCGTCAAGGTCAGCGGCGAGGTGACGAGGCGCCAGCAGAAAGCGGAGGACCGCCTTGCGGCCGGCGCGCCGCTGATGGACAACGACCTCGTGGTCACCGCAGCCGAGAGTTTTGCCGACCTGAAGCTTGGCAGCGATACCCGTGTGCTGCTCGGCGGCGACACGGAGCTTCTGATCGACAGCTTCATCGCCGGACAGGGCGGCACGCTGGAACTCGGCGCCGGCGCCATGATGTTCGATCGTCCGGAGGGTCTTGCCAAGATCGATGTCAGCGTGCGCACCACTTTCGGCATGATCGGCGTGCGCGGCACGAAGTTTTTCGCCGGGCCGAGCCGCGGCCGCTTCGCGGTTTTCGTCGAACACGGCAAGGTCGCCGTCACCAATGGCGGCACGACCCGCGAAGTGGGCAAGGGACAGGGTGTGGAAATCGCTTCCGTGGATGCGCGGCCGAGCGAACCCGTCGATTGGGGCAAGCAACGCATCCGCGAGGCCTATGCGCTGGTGGGCGCCCGCTGA
PROTEIN sequence
Length: 213
MTMKYAQRTVTLLTRRTLMVGAGAMAILPAWTPAHASAIGETVKVSGEVTRRQQKAEDRLAAGAPLMDNDLVVTAAESFADLKLGSDTRVLLGGDTELLIDSFIAGQGGTLELGAGAMMFDRPEGLAKIDVSVRTTFGMIGVRGTKFFAGPSRGRFAVFVEHGKVAVTNGGTTREVGKGQGVEIASVDARPSEPVDWGKQRIREAYALVGAR*