ggKbase home page

SCNpilot_expt_1000_bf_scaffold_770_curated_13

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(11294..12016)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FD05_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 238.0
  • Bit_score: 305
  • Evalue 5.80e-80
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EHS49231.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 238.0
  • Bit_score: 305
  • Evalue 8.10e-80
Fnr-like transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 220.0
  • Bit_score: 170
  • Evalue 9.20e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
GTGACGAACGATATCCTGCTTTTCCCCTCGCGGAAGCACCCCATCAGCCTTCGTATCTCCTCGATCTTTGCCAGTCTTCAGGAGGAGGAGGACCGGGCCTGGTCGCAACGCTGTCATGTCCGCTGCCTTCGCGCCGGCGAAAACCTTGTGGACCATGCCGACGAATCGACCGACCTTTTCCTGCTGCAGAGCGGCGAAGTTCGCGCCGTGCTGCGCTTCGGCGTCGGCAAGGAAGCGATCGTCGGCGTCTTCCGCCGGCATGAGCTGATGGGCGAGCTTTCCGCCATCGACGAAATGCCGCGCGCCGCCAGCCTGACGGCGGTCAATGATTCCGTCGTGACCGTCATTCCATCGGCGGTCTTCAACGACATTCTCGGCAGCAAGCCGCAAGTCAACAAGGCCGTGCTGCAGCTTCTTTCGCTGCGCATGCGGCAGCTGAACGACCGGGTGTCGGAACTGTCCTTCCTCGACACCAAGCACCGGCTCTACAACACGCTGCTGCGGCTTTCCCGCATCCGCATGGACGGCGGCGGCGAACGGGTGATCTCGCCGCCGATCGTGCATTCGGAACTGGCCGAACATATCGGCTCCAGCCGCGAGACGGTGTCGCGCGAAATGGCCCGCCTGATGCGCGAAGCCCTCGTCGAGCGCACCAGCCGGGCGATCATCCTCAAGGACCCGGGTGAGCTCTCGAGCCGGATCTCGCGGGCATTGCAGAACTGA
PROTEIN sequence
Length: 241
VTNDILLFPSRKHPISLRISSIFASLQEEEDRAWSQRCHVRCLRAGENLVDHADESTDLFLLQSGEVRAVLRFGVGKEAIVGVFRRHELMGELSAIDEMPRAASLTAVNDSVVTVIPSAVFNDILGSKPQVNKAVLQLLSLRMRQLNDRVSELSFLDTKHRLYNTLLRLSRIRMDGGGERVISPPIVHSELAEHIGSSRETVSREMARLMREALVERTSRAIILKDPGELSSRISRALQN*