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SCNpilot_expt_1000_bf_scaffold_7011_curated_1

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(3..1514)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor NusA n=1 Tax=Rhizobium sp. CF142 RepID=J2B424_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 504.0
  • Bit_score: 938
  • Evalue 2.80e-270
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A similarity KEGG
DB: KEGG
  • Identity: 95.4
  • Coverage: 504.0
  • Bit_score: 938
  • Evalue 1.20e-270
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 504.0
  • Bit_score: 938
  • Evalue 4.00e-270

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1512
ATGGCAGTCAGTGCGAACCGGCTAGAACTTCTGCAGATCGCGGATGCTGTGGCGCGCGAAAAGGTGATCGACCGGGAGATCGTTCTCGCTGCAATGGCCGACGCCATCCAGAAGGCGGCGCGTTCCCGCTACGGTACCGAATCGAACATCCGCGCCGACATCAACTCGAAGACCGGCGAAATCCGCCTGCAGCGTCTTCTGGAAGTGGTCGAAAAGGCCGACGATTATTCGACGCAGATCCCGCTGGAGCTGGCCCGCGACCGCAACCCGGACGCCAAGCTCGGCGATTTCATCGCCGATCCGCTGCCGCCGATGGATTTCGGCCGCATCGCCGCCCAGTCCGCCAAGCAGGTCATCGTCCAGAAGGTGCGCGAAGCCGAGCGTGACCGCCAGTTCGACGAATTCAAGGATCGCATCGGCGAAATCATCAACGGCACGGTCAAGCGCGTCGAATACGGCAACGTTATCGTCGATCTCGGCCGTGGCGAAGGCATCATCCGCCGCGACGAGATGATCCCGCGCGAAAACATGCGCTACGGCGATCGCGTCCGCGCCTTCGTCTACGATGTCCGCCGCGAGCAGCGCGGCCCGCAGATTTTCCTGTCACGTACTCATCCGCAGTTCATGGTGAAGCTGTTCACCATGGAAGTGCCCGAGATCTACGACGGCATCATCCAGATCAAGTCGGTCGCCCGCGATCCGGGTTCGCGTGCCAAGATCGCCGTCATCTCCAACGACTCGTCGATCGATCCGGTCGGCGCCTGCGTCGGTATGCGCGGTAGCCGTGTCCAGGCCGTCGTCGGCGAACTGCAGGGCGAAAAGATCGACATCATTCCGTGGTCCAACGAGCCGGCGAACTTCGTCGTCAACGCTCTGCAGCCGGCGGAAGTCTCCAAGGTCGTTCTCGACGAGGATGCCGAGCGCATCGAAGTCGTGGTGCCGGACGAGCAGCTGTCGCTCGCCATCGGCCGACGCGGCCAGAACGTCCGCCTCGCATCGCAGCTGACCGGCTGGGATATCGACATCATGACGGAGCAGGAAGAGTCCGAGCGCCGCCAGAAGGAATTCAACGAGCGCACCAACCTGTTCATGGACGCGCTCGACGTCGACGAGATGGTCGGCCAGGTGCTGGCGTCGGAAGGTTTTGCCGCCGTCGAGGAACTGGCTTACGTCGATCTCGACGAAATCTCCTCGATCGACGGTTTCGACGAAGACACGGCCGTCGAGATCCAGACGCGCGCCCGCGAATTCCTCGACCGCCTCGAAGCCGAGATGGACGAGAAGCGCAAGGCGCTCGGCGTTGCCGACGAACTGCGCACCATCGACGGCATGACGGCGCAGATGATGGTCGCGCTCGGCGAGGACGGCATCAAGACGGTCGAAGATTTTGCCGGCTGCGCGGCCGACGACCTCGTCGGCTGGTCGGAGCGCAAGGATGGCGAGACGAAGAAGTTCGAGGGCCTGTTCTCGAAGTTCGACGTATCGCGCGTCGAGGCTGAAAACATGATCGTC
PROTEIN sequence
Length: 504
MAVSANRLELLQIADAVAREKVIDREIVLAAMADAIQKAARSRYGTESNIRADINSKTGEIRLQRLLEVVEKADDYSTQIPLELARDRNPDAKLGDFIADPLPPMDFGRIAAQSAKQVIVQKVREAERDRQFDEFKDRIGEIINGTVKRVEYGNVIVDLGRGEGIIRRDEMIPRENMRYGDRVRAFVYDVRREQRGPQIFLSRTHPQFMVKLFTMEVPEIYDGIIQIKSVARDPGSRAKIAVISNDSSIDPVGACVGMRGSRVQAVVGELQGEKIDIIPWSNEPANFVVNALQPAEVSKVVLDEDAERIEVVVPDEQLSLAIGRRGQNVRLASQLTGWDIDIMTEQEESERRQKEFNERTNLFMDALDVDEMVGQVLASEGFAAVEELAYVDLDEISSIDGFDEDTAVEIQTRAREFLDRLEAEMDEKRKALGVADELRTIDGMTAQMMVALGEDGIKTVEDFAGCAADDLVGWSERKDGETKKFEGLFSKFDVSRVEAENMIV