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SCNpilot_expt_1000_bf_scaffold_7011_curated_3

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(2401..3639)

Top 3 Functional Annotations

Value Algorithm Source
Membrane-bound lytic murein transglycosylase B n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CIT6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 403.0
  • Bit_score: 628
  • Evalue 6.70e-177
Lytic murein transglycosylase {ECO:0000313|EMBL:EUC00750.1}; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 411.0
  • Bit_score: 635
  • Evalue 4.50e-179
putative lytic murein transglycosylase similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 413.0
  • Bit_score: 619
  • Evalue 5.70e-175

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Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1239
ATGCGGATATCGTCGGTTGTTCTGCTTGTTCTTTCCGTCTTCCTGCCCTTGCCGGCCATGGCGGCCGACAAGGCCGCCGTCGAAAAGCAGTTCCGCGCCTGGATCGCCAGGGAACTTGCCCCGGAAGCGGAAAAATCCGGCGTCTCGAAGCAGACGATCACGGCGGCCTTCGACGGCGTGACACTCAACTGGGACCTGCCCGATCTCGTGCCGCCGGGCGAAAAGCCCAAGGGCGAACAGAAGCAGAGCCAGGCCGAGTTTTCTTCGCCGGCCAGTTACTTTTCCGAGAAACGCCTGCAGGGGCTGGCCGCCTCGGGCAAGACGCTGGCGGCGACGCATGCCGCGACGCTGAAGAAGATCGAGCGCACCTACGGCGTGCCGGGTTCCGTCGTGCTGGCGATCTGGGGCCGTGAAAGCGGTTTTGGCCGCGCCGCCATTCCTTACTCGGCTATCGAGGTGCTGGCCACCAAGGCCTTCATGTCGACCCGCAAGGATCTGTTCCGCCGCGAGCTGATCGCCGCGCTGCACATCATCGACGGCGGCGACGTCAAGGCCGGCGATATGAAGGGGTCGTGGGCCGGCGCCATGGGCCAGCCGCAGTTCCTGCCGACCAGCTACCTGAAATATGCCGTCGACTTCGATGGCGACGGCCATCGCAACATCTGGACCTCGGTGCCCGACAGCCTTGCCTCGATCGCCAACTATCTGGCGAAGAAGGGCTGGAAGGCAAATCGTGACTGGGGTTTCGAGGTGACGATCCCGGCCGGCGTCAGCTGTGCCCAGGAAGGTCCCGATCTCGCAAAGCCGCTCTCCGACTGGGGCGCGCTCGGCATCAGGCGCATCACCGGCAAGGCGTTTCCATNNNNNNNNNNNNNNNNNGAAAGCATGATGTTGCTGCCCGCCGGCCGGCACGGGCCGGAGTTCATCGTCTCGCCGAATTTCTACGTCATCAAGGAATACAACAATTCCGACCTCTATGCCCTGTTCATCGGCAATCTTGCCGATCGTATCGCTTTCGGTTCCGGCCCGTTCAAGGCCGAATGGGGCAGCGTCGGCAAGATGTTGCGCTCCGACGTGCTCGCCATGCAGAAGTCGCTGGTGGCCAAGGGCTACGACGTCGGCAAGGTTGACGGCCTGCCCGGATACAAGACCCGCCGGTCGCTCGGCGACTGGCAGCAGAAGAACGGCTTGCAGCCGAGTTGCTATCCCGATGAATCGTTGAAATCGGCGCTTCGGTAA
PROTEIN sequence
Length: 413
MRISSVVLLVLSVFLPLPAMAADKAAVEKQFRAWIARELAPEAEKSGVSKQTITAAFDGVTLNWDLPDLVPPGEKPKGEQKQSQAEFSSPASYFSEKRLQGLAASGKTLAATHAATLKKIERTYGVPGSVVLAIWGRESGFGRAAIPYSAIEVLATKAFMSTRKDLFRRELIAALHIIDGGDVKAGDMKGSWAGAMGQPQFLPTSYLKYAVDFDGDGHRNIWTSVPDSLASIANYLAKKGWKANRDWGFEVTIPAGVSCAQEGPDLAKPLSDWGALGIRRITGKAFPXXXXXXESMMLLPAGRHGPEFIVSPNFYVIKEYNNSDLYALFIGNLADRIAFGSGPFKAEWGSVGKMLRSDVLAMQKSLVAKGYDVGKVDGLPGYKTRRSLGDWQQKNGLQPSCYPDESLKSALR*