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SCNpilot_expt_1000_bf_scaffold_7011_curated_6

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(4928..5539)

Top 3 Functional Annotations

Value Algorithm Source
lysine transporter LysE n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003738D8C similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 203.0
  • Bit_score: 317
  • Evalue 9.60e-84
Lysine transporter LysE {ECO:0000313|EMBL:KGD98192.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 203.0
  • Bit_score: 331
  • Evalue 6.90e-88
amino acid efflux transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 203.0
  • Bit_score: 317
  • Evalue 3.90e-84

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGACGCTGACATCATTGCTTGTTTTTGCCGGGGCGCTGCTGGTGGCGGCCGGCTCGCCGGGGCCGAGCATTGCGGCGCTCGTCGCCCGCGTGCTCTCCAAGGGCTACCGCGACGTGCTGCCCTTCCTCGCTGCGATGTGGATCGGCGAAGCCGTCTGGCTGTCCTTTGCCGTCGCCGGCCTGGCGACGATCGCCGAAACCTTCCACGTCGTCTTCGTGGCGATCAAGTGGCTCGGCGTCGCCTATCTGCTCTACCTCGCCTGGAAGATGTGGTTCGCGCCGGCGGCGATGAGCGAGGATGCCCTGCCGGAGCGGACGTCGGCCGCAAAACTGTTCTTCGCCGGCCTGACGGTGACGCTCGGAAATCCGAAGATCATGATGTTTTACGTGGCGCTGCTGCCGTCGATCATCGATCTTGCCGGCGTCACGCTCGTCGGCTGGGTGGAACTGGTGGTCACCATGCTGGTGGTGCTGGTCATCGTCGATTTCGTCTGGGTAGCGACCGCCGCCAAGGCGCGGCAGTTCCTCAAGAGCCCGCGTGCGGTGCGGTTTGCCAACCGCGCCAGCGCCGGCGCCATGGCAGGGGCGGCGGTGGCGATCGCCGCGCGCTGA
PROTEIN sequence
Length: 204
MTLTSLLVFAGALLVAAGSPGPSIAALVARVLSKGYRDVLPFLAAMWIGEAVWLSFAVAGLATIAETFHVVFVAIKWLGVAYLLYLAWKMWFAPAAMSEDALPERTSAAKLFFAGLTVTLGNPKIMMFYVALLPSIIDLAGVTLVGWVELVVTMLVVLVIVDFVWVATAAKARQFLKSPRAVRFANRASAGAMAGAAVAIAAR*