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SCNpilot_expt_1000_bf_scaffold_7011_curated_8

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(5942..6916)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:KEA07950.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KEA07950.1};; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 326.0
  • Bit_score: 428
  • Evalue 6.60e-117
dnaX; DNA polymerase III subunits gamma and tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] similarity KEGG
DB: KEGG
  • Identity: 66.6
  • Coverage: 326.0
  • Bit_score: 426
  • Evalue 5.60e-117
DNA polymerase III, subunit gamma/tau n=1 Tax=Rhizobium sp. AP16 RepID=J2WWW4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 326.0
  • Bit_score: 428
  • Evalue 4.70e-117

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
TTGACCGATCTGGCCGACTTCACCCATCTGGTCACCCGCCTCAAATACGTGCCCGAAGCGGTCAACGACCCGTCGCTGAGCGAGATCGAGCGTACGCGAGGCCGGGAATTTGCCGAAAACATCGCGGTGACGACGCTGTCGCGCATCTGGCAGATGCTGCTGAAGGGCATTCCCGAGGTCGAGACCGCGTCGCGGCCGGCGGGGGCTGCCGAAATGGTGCTGATCCGGCTTGCGCATGCGGCCCACCTGCCGTCGCCGGAAGATGCGGCGCGGCGTCTCGCCGAATTCGCGTCCGGCGAGGCACCCGCCCCCCGGTCGCTTGCGCCTTCGGGTGGCAATGGCGGCGGCACGCCGGTCGCCTATCAGTCGTCGGTTCTGGCAAGGGCAGCGGAAGCCGCGCCGGCCTGTCCGGCCACGGCACCCGTGACCATGCTGCGTTCCGTGCCCGCGCCGGAAACCAGGCCGGACGCTGTGCCGGTCGGCCGGGTGGAGATGGCGCCCGCAGCGCAGCCCGAACCCAAGGTCAAGATCGCCTCGCTTGCGGATATCGCCGAGCTTTGCACCAAGAACCGTGATCCGAAGCTCAGGGCGCTGTTGCGCGCCTTCGTCGGCCTCGTCGGACTGGAGCCCGGCCGCCTCGAGATCAACCTCAAGCCGGACGCGCCGAAATCGATGGTCGGCGAGTTGCAGAAGCGCTTGGAAGAGTGGACCGGCATCCGCTGGATGGTGATCCTCAGCCGCGAGGAAGGCGGGCCGACACTGGCCGAGGCGGAAGAAAGCGACAAGGCGACCCGCCTGCAGGATGCCCGGCAGGACCCCGACGTCGCCGCCATCCTGTCGCGTTTCCCCGGCGCCAAGATCATCGACGTGCGCATCCGTGCGCCCGAGGTGGAAGAGGAAGAAAACCAGGCGCTGCCGGCCGCTGCCGAATCGGCCGAGGGCGATATCCTTCCCGGCGACGATATCGAATTCTAA
PROTEIN sequence
Length: 325
LTDLADFTHLVTRLKYVPEAVNDPSLSEIERTRGREFAENIAVTTLSRIWQMLLKGIPEVETASRPAGAAEMVLIRLAHAAHLPSPEDAARRLAEFASGEAPAPRSLAPSGGNGGGTPVAYQSSVLARAAEAAPACPATAPVTMLRSVPAPETRPDAVPVGRVEMAPAAQPEPKVKIASLADIAELCTKNRDPKLRALLRAFVGLVGLEPGRLEINLKPDAPKSMVGELQKRLEEWTGIRWMVILSREEGGPTLAEAEESDKATRLQDARQDPDVAAILSRFPGAKIIDVRIRAPEVEEEENQALPAAAESAEGDILPGDDIEF*